Information for 23-AATAGTCAAC (Motif 36)

C G T A C G T A A C G T C G T A A C T G A C G T A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C G T
p-value:1e-3
log p-value:-7.632e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets82.0 +/- 0.0bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AATAGTCAAC
AAAAGTCAA-
 C G T A C G T A A C G T C G T A A C T G A C G T A G T C C G T A C G T A A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AATAGTCAAC----
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AATAGTCAAC
ACTAGTTAAC
 C G T A C G T A A C G T C G T A A C T G A C G T A G T C C G T A C G T A A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AATAGTCAAC-----
NNNTTAGTTAACTNANN
 A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AATAGTCAAC---
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AATAGTCAAC---
-TATGTAAACANG
 C G T A C G T A A C G T C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AATAGTCAAC
CCAAAAATAG-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A G T C C G T A C G T A A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AATAGTCAAC
GAATATTCAT-
 A C G T C G T A C G T A A C G T C G T A A C T G A C G T A G T C C G T A C G T A A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AATAGTCAAC---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATAGTCAAC------
TGATTGTTAACAGTTGG
 A C G T C G T A C G T A A C G T C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G