Information for 19-CGCCACAGCA (Motif 32)

A G T C A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C T G
p-value:1e-3
log p-value:-7.632e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 0.0bp
Average Position of motif in Background34.5 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CGCCACAGCA
---CACAGN-
 A G T C A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CGCCACAGCA-----
---CACAGCAGGGGG
 A G T C A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCCACAGCA-----
CCACACAGCAGGAGA
 A G T C A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGCCACAGCA-----
AATCGCACTGCATTCCG
 A C G T A C G T A G T C A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGCCACAGCA-----
GAGCACAGCAGGACA
 A G T C A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGCCACAGCA
AAACCACAGC-
 A C G T A G T C A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGCCACAGCA-----
CCACACAGCAGGAGA
 A G T C A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGCCACAGCA
AAACCACAGAN
 A C G T A G T C A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGCCACAGCA
NWAACCACADNN
 A C G T A C G T A G T C A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

EGR3/MA0732.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGCCACAGCA--
CTACGCCCACGCACT
 A C G T A C G T A C G T A G T C A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T