Information for 16-CGGCAAGGGG (Motif 31)

A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G
p-value:1e-3
log p-value:-7.632e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets17.0 +/- 0.0bp
Average Position of motif in Background57.4 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGGCAAGGGG
AAGGCAAGTGT
 A C G T A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGGCAAGGGG---
-TGTCAGGGGGCG
 A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGGCAAGGGG--
NCGCAGCGGGGGGTC
 A C G T A C G T A C G T A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGGCAAGGGG--
NCNCAGCGGGGGGTC
 A C G T A C G T A C G T A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAAGGGG--
CACAGCGGGGGGTC
 A C G T A C G T A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGGCAAGGGG
CACAGCAGGGGG
 A C G T A C G T A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGGCAAGGGG---
---GGAGGGGGAA
 A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGGCAAGGGG--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAAGGGG--------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGGCAAGGGG
-GGGGGGGG-
 A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A C T G
A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T