Information for 12-VCBGAGGAAAGCC (Motif 30)

T A C G A T G C A G T C A C T G C T G A A C T G A C T G C T G A C G T A C T G A C T A G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C A G C T A C G T A G C T A G T C A G T C A G C T G T A C T A C G A T C G A G T C
p-value:1e-3
log p-value:-7.930e+00
Information Content per bp:1.738
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif117.5
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets35.3 +/- 15.8bp
Average Position of motif in Background51.1 +/- 40.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:VCBGAGGAAAGCC--
-----GGAAANCCCC
 T A C G A T G C A G T C A C T G C T G A A C T G A C T G C T G A C G T A C T G A C T A G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:VCBGAGGAAAGCC--
-----GGAAATCCCC
 T A C G A T G C A G T C A C T G C T G A A C T G A C T G C T G A C G T A C T G A C T A G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:VCBGAGGAAAGCC
--AGAGGAA----
 T A C G A T G C A G T C A C T G C T G A A C T G A C T G C T G A C G T A C T G A C T A G A G T C A G T C
A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:VCBGAGGAAAGCC--
-----GGAAATTCCC
 T A C G A T G C A G T C A C T G C T G A A C T G A C T G C T G A C G T A C T G A C T A G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:VCBGAGGAAAGCC---
----GGGAAATCCCCN
 T A C G A T G C A G T C A C T G C T G A A C T G A C T G C T G A C G T A C T G A C T A G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:VCBGAGGAAAGCC
----TGGAAAA--
 T A C G A T G C A G T C A C T G C T G A A C T G A C T G C T G A C G T A C T G A C T A G A G T C A G T C
A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:VCBGAGGAAAGCC--
---GGGGGAATCCCC
 T A C G A T G C A G T C A C T G C T G A A C T G A C T G C T G A C G T A C T G A C T A G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:VCBGAGGAAAGCC
-NDCAGGAARTNN
 T A C G A T G C A G T C A C T G C T G A A C T G A C T G C T G A C G T A C T G A C T A G A G T C A G T C
A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:VCBGAGGAAAGCC
-CSTGGGAAAD--
 T A C G A T G C A G T C A C T G C T G A A C T G A C T G C T G A C G T A C T G A C T A G A G T C A G T C
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:VCBGAGGAAAGCC
-GGGCGGGAAGG-
 T A C G A T G C A G T C A C T G C T G A A C T G A C T G C T G A C G T A C T G A C T A G A G T C A G T C
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T