Information for 10-CRGAGCTNACTAKTTT (Motif 12)

G T A C C T G A C T A G C T G A T A C G G A T C C G A T A G T C G T C A A T G C C A G T T G C A A C G T A G C T A C G T A C G T
Reverse Opposite:
T G C A T G C A T C G A G T C A A C G T G C T A A T C G C A G T A C T G C G T A C T A G A T G C G A C T A G T C A G C T C A T G
p-value:1e-5
log p-value:-1.157e+01
Information Content per bp:1.595
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif176.3
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets62.7 +/- 35.4bp
Average Position of motif in Background53.5 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CRGAGCTNACTAKTTT--
-GANGTTAACTAGTTTNN
 G T A C C T G A C T A G C T G A T A C G G A T C C G A T A G T C G T C A A T G C C A G T T G C A A C G T A G C T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CRGAGCTNACTAKTTT
----GTTAACTAGN--
 G T A C C T G A C T A G C T G A T A C G G A T C C G A T A G T C G T C A A T G C C A G T T G C A A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:3
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CRGAGCTNACTAKTTT-
CAAAGCTAATTAGNTTN
 G T A C C T G A C T A G C T G A T A C G G A T C C G A T A G T C G T C A A T G C C A G T T G C A A C G T A G C T A C G T A C G T A C G T
G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

SPI1/MA0080.4/Jaspar

Match Rank:4
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CRGAGCTNACTAKTTT-
---TACTTCCGCTTTTT
 G T A C C T G A C T A G C T G A T A C G G A T C C G A T A G T C G T C A A T G C C A G T T G C A A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

PH0107.1_Msx2/Jaspar

Match Rank:5
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CRGAGCTNACTAKTTT--
-ANCGCTAATTGGTCTNN
 G T A C C T G A C T A G C T G A T A C G G A T C C G A T A G T C G T C A A T G C C A G T T G C A A C G T A G C T A C G T A C G T A C G T A C G T
A C G T T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

PB0046.1_Mybl1_1/Jaspar

Match Rank:6
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:CRGAGCTNACTAKTTT---
--NNANTAACGGTTNNNAN
 G T A C C T G A C T A G C T G A T A C G G A T C C G A T A G T C G T C A A T G C C A G T T G C A A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

PB0136.1_IRC900814_2/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CRGAGCTNACTAKTTT----
----TTTTACGACTTTCCAT
 G T A C C T G A C T A G C T G A T A C G G A T C C G A T A G T C G T C A A T G C C A G T T G C A A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PH0028.1_En1/Jaspar

Match Rank:8
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:CRGAGCTNACTAKTTT--
--GNATTAATTAGTTNNC
 G T A C C T G A C T A G C T G A T A C G G A T C C G A T A G T C G T C A A T G C C A G T T G C A A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:CRGAGCTNACTAKTTT-
AGCTGTTAACTAGCCGT
 G T A C C T G A C T A G C T G A T A C G G A T C C G A T A G T C G T C A A T G C C A G T T G C A A C G T A G C T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----CRGAGCTNACTAKTTT
CGAACAGTGCTCACTAT---
 A C G T A C G T A C G T A C G T G T A C C T G A C T A G C T G A T A C G G A T C C G A T A G T C G T C A A T G C C A G T T G C A A C G T A G C T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T A C G T