Information for 2-CTBTAGTDTCACG (Motif 6)

G T A C A C G T A G T C A C G T C G T A C T A G A C G T C A G T A C G T A T G C C G T A A G T C A T C G
Reverse Opposite:
A T G C T C A G A C G T A T C G C G T A G C T A G T C A A G T C A C G T G T C A T C A G C G T A A C T G
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.727
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif56.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets63.0 +/- 17.9bp
Average Position of motif in Background54.8 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTBTAGTDTCACG-
------AGTCACGC
 G T A C A C G T A G T C A C G T C G T A C T A G A C G T C A G T A C G T A T G C C G T A A G T C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTBTAGTDTCACG--
TCTCAAAGGTCACCTG
 A C G T G T A C A C G T A G T C A C G T C G T A C T A G A C G T C A G T A C G T A T G C C G T A A G T C A T C G A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTBTAGTDTCACG--
TCTCAAAGGTCACGAG
 A C G T G T A C A C G T A G T C A C G T C G T A C T A G A C G T C A G T A C G T A T G C C G T A A G T C A T C G A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTBTAGTDTCACG
----AAGGTCAC-
 G T A C A C G T A G T C A C G T C G T A C T A G A C G T C A G T A C G T A T G C C G T A A G T C A T C G
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

Mitf/MA0620.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTBTAGTDTCACG---
------GGTCACGTGG
 G T A C A C G T A G T C A C G T C G T A C T A G A C G T C A G T A C G T A T G C C G T A A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTBTAGTDTCACG---
GATGGGGTATCATTTTT
 A C G T G T A C A C G T A G T C A C G T C G T A C T A G A C G T C A G T A C G T A T G C C G T A A G T C A T C G A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTBTAGTDTCACG
-TTCAAGGTCAT-
 G T A C A C G T A G T C A C G T C G T A C T A G A C G T C A G T A C G T A T G C C G T A A G T C A T C G
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T

PH0162.1_Six2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTBTAGTDTCACG---
AATGGGGTATCACGTTT
 A C G T G T A C A C G T A G T C A C G T C G T A C T A G A C G T C A G T A C G T A T G C C G T A A G T C A T C G A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CTBTAGTDTCACG
-------GTCATN
 G T A C A C G T A G T C A C G T C G T A C T A G A C G T C A G T A C G T A T G C C G T A A G T C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTBTAGTDTCACG---
TATTCAAGGTCATGCGA
 A C G T G T A C A C G T A G T C A C G T C G T A C T A G A C G T C A G T A C G T A T G C C G T A A G T C A T C G A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A