Information for 21-CTGTCTCGAA (Motif 50)

A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C T G C G T A A C T G C G T A A G T C C G T A A C T G
p-value:1e-3
log p-value:-7.253e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background60.6 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTGTCTCGAA
CTGTCTGG--
 A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C T G C G T A C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTCGAA---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGTCTCGAA-
-TGTCTAGACG
 A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C T G C G T A C G T A A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTCGAA
VBSYGTCTGG--
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C T G C G T A C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGTCTCGAA---
CTGTCTGTCACCT
 A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

ZBED1/MA0749.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTCGAA--
TATGTCGCGATAG
 A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C T G C G T A C G T A A C G T A C G T
G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGTCTCGAA
GCTGTG-----
 A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C T G C G T A C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGTCTCGAA----
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTCGAA---
AGTATTCTCGGTTGC
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTCGAA
CCTGTCAA---
 A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C T G C G T A C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T