Information for 4-GTCTCACCCATACABA (Motif 5)

A C T G C G A T A G T C G A C T A T G C C G T A A G T C G T A C A T G C G T C A C G A T T G C A A T G C G T C A A C G T C G T A
Reverse Opposite:
C G A T T C G A A C G T A T C G A C G T G C T A A C G T A T C G A C T G C T A G C G A T A T C G C T G A T C A G C G T A A G T C
p-value:1e-8
log p-value:-2.045e+01
Information Content per bp:1.721
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets23.0 +/- 8.0bp
Average Position of motif in Background52.0 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GTCTCACCCATACABA
----CRCCCACGCA--
 A C T G C G A T A G T C G A C T A T G C C G T A A G T C G T A C A T G C G T C A C G A T T G C A A T G C G T C A A C G T C G T A
A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTCTCACCCATACABA
GCCMCRCCCH------
 A C T G C G A T A G T C G A C T A T G C C G T A A G T C G T A C A T G C G T C A C G A T T G C A A T G C G T C A A C G T C G T A
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GTCTCACCCATACABA---
--AACACCAAAACAAAGGA
 A C T G C G A T A G T C G A C T A T G C C G T A A G T C G T A C A T G C G T C A C G A T T G C A A T G C G T C A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GTCTCACCCATACABA
GCCACACCCA------
 A C T G C G A T A G T C G A C T A T G C C G T A A G T C G T A C A T G C G T C A C G A T T G C A A T G C G T C A A C G T C G T A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCACCCATACABA
GGCCACRCCCMK-----
 A C G T A C T G C G A T A G T C G A C T A T G C C G T A A G T C G T A C A T G C G T C A C G A T T G C A A T G C G T C A A C G T C G T A
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GTCTCACCCATACABA
TGTTKCCTAGCAACM--
 A C G T A C T G C G A T A G T C G A C T A T G C C G T A A G T C G T A C A T G C G T C A C G A T T G C A A T G C G T C A A C G T C G T A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GTCTCACCCATACABA
CTGTCTGTCACCT-----
 A C G T A C G T A C T G C G A T A G T C G A C T A T G C C G T A A G T C G T A C A T G C G T C A C G A T T G C A A T G C G T C A A C G T C G T A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GTCTCACCCATACABA
GCCCCGCCCC------
 A C T G C G A T A G T C G A C T A T G C C G T A A G T C G T A C A T G C G T C A C G A T T G C A A T G C G T C A A C G T C G T A
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCACCCATACABA
TGTCTGDCACCT-----
 A C G T A C T G C G A T A G T C G A C T A T G C C G T A A G T C G T A C A T G C G T C A C G A T T G C A A T G C G T C A A C G T C G T A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GTCTCACCCATACABA
GGCCACACCCA------
 A C G T A C T G C G A T A G T C G A C T A T G C C G T A A G T C G T A C A T G C G T C A C G A T T G C A A T G C G T C A A C G T C G T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T