Information for 20-TTTTTTGCTA (Motif 49)

A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A
p-value:1e-3
log p-value:-7.253e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background69.9 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTGCTA---
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTTGCTA---
NNTTTTTCTTATNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTTGCTA--
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTGCTA--
TTTTTTTTCNNGTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTTGCTA--
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTTGCTA
TTTTATGGCTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTTGCTA--
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTGCTA
NTTTTATGAC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTTGCTA
TTTTATTGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTGCTA
TTTTTATTGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T