Motif 42

Information for 23-CCCTCTCTCCCCT (Motif 42)

Reverse Opposite:

p-value:	1e-3
log p-value:	-7.946e+00
Information Content per bp:	1.530
Number of Target Sequences with motif	1.0
Percentage of Target Sequences with motif	6.25%
Number of Background Sequences with motif	1.4
Percentage of Background Sequences with motif	0.00%
Average Position of motif in Targets	76.0 +/- 0.0bp
Average Position of motif in Background	59.3 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)	10.0
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:	1
Score:	0.60
Offset:	7
Orientation:	reverse strand
Alignment:	CCCTCTCTCCCCT -------TCCCCA

NR2C2/MA0504.1/Jaspar

Match Rank:	2
Score:	0.58
Offset:	-2
Orientation:	reverse strand
Alignment:	--CCCTCTCTCCCCT TGACCTCTGACCCCN

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:	3
Score:	0.57
Offset:	5
Orientation:	reverse strand
Alignment:	CCCTCTCTCCCCT-- -----TTCCCCCTAC

PB0202.1_Zfp410_2/Jaspar

Match Rank:	4
Score:	0.57
Offset:	0
Orientation:	forward strand
Alignment:	CCCTCTCTCCCCT---- TCACCCCGCCCCAAATT

PB0097.1_Zfp281_1/Jaspar

Match Rank:	5
Score:	0.56
Offset:	-3
Orientation:	forward strand
Alignment:	---CCCTCTCTCCCCT TCCCCCCCCCCCCCC-

E2F6/MA0471.1/Jaspar

Match Rank:	6
Score:	0.56
Offset:	0
Orientation:	reverse strand
Alignment:	CCCTCTCTCCCCT NCTTCCCGCCC--

PB0124.1_Gabpa_2/Jaspar

Match Rank:	7
Score:	0.56
Offset:	0
Orientation:	forward strand
Alignment:	CCCTCTCTCCCCT--- CCGTCTTCCCCCTCAC

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:	8
Score:	0.55
Offset:	1
Orientation:	forward strand
Alignment:	CCCTCTCTCCCCT -CCCCTCCCCCAC

PB0137.1_Irf3_2/Jaspar

Match Rank:	9
Score:	0.55
Offset:	-4
Orientation:	reverse strand
Alignment:	----CCCTCTCTCCCCT NNGCACCTTTCTCC---

PB0110.1_Bcl6b_2/Jaspar

Match Rank:	10
Score:	0.54
Offset:	1
Orientation:	forward strand
Alignment:	CCCTCTCTCCCCT---- -ATCCCCGCCCCTAAAA