Information for 17-TCATTCAAAAAAG (Motif 38)

A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A
p-value:1e-3
log p-value:-7.946e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCATTCAAAAAAG
-NATTCAAAT---
 A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C T G
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TCATTCAAAAAAG
NNCATTCATTCATNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C T G
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCATTCAAAAAAG
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C T G
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCATTCAAAAAAG-
ACATTCATGACACG
 A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C T G A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCATTCAAAAAAG
CCATCAATCAAA----
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C T G
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCATTCAAAAAAG
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C T G
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCATTCAAAAAAG-
TACTGGAAAAAAAA
 A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C T G A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0005.1_Bbx_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCATTCAAAAAAG--
TAATTCAATGAAGTG
 A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C T G A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCATTCAAAAAAG
CGGTTTCAAA----
 A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCATTCAAAAAAG
CCAATCAA-----
 A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C T G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T