Information for 1-DCBAHSGBAB (Motif 29)

C A G T A T G C A G T C C G T A G C T A A T G C T A C G A G T C G C T A A C T G
Reverse Opposite:
T G A C C G A T T C A G A T G C T A C G C G A T C G A T T C A G A T C G G T C A
p-value:1e-3
log p-value:-7.999e+00
Information Content per bp:1.524
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif31.25%
Number of Background Sequences with motif1840.5
Percentage of Background Sequences with motif4.07%
Average Position of motif in Targets58.2 +/- 18.4bp
Average Position of motif in Background49.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL001.1_MTE/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--DCBAHSGBAB-------
TTTCGAGCGGAACGGTCGC
 A C G T A C G T C A G T A T G C A G T C C G T A G C T A A T G C T A C G A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----DCBAHSGBAB--
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T C A G T A T G C A G T C C G T A G C T A A T G C T A C G A G T C G C T A A C T G A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--DCBAHSGBAB--
TTGCCATGGCAACC
 A C G T A C G T C A G T A T G C A G T C C G T A G C T A A T G C T A C G A G T C G C T A A C T G A C G T A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--DCBAHSGBAB--
TTGCCATGGCAACN
 A C G T A C G T C A G T A T G C A G T C C G T A G C T A A T G C T A C G A G T C G C T A A C T G A C G T A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

RFX5/MA0510.2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----DCBAHSGBAB--
NGTTGCCATGGCAACG
 A C G T A C G T A C G T A C G T C A G T A T G C A G T C C G T A G C T A A T G C T A C G A G T C G C T A A C T G A C G T A C G T
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----DCBAHSGBAB--
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T C A G T A T G C A G T C C G T A G C T A A T G C T A C G A G T C G C T A A C T G A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-DCBAHSGBAB
AACAAAGG---
 A C G T C A G T A T G C A G T C C G T A G C T A A T G C T A C G A G T C G C T A A C T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-DCBAHSGBAB
TGCCAA-----
 A C G T C A G T A T G C A G T C C G T A G C T A A T G C T A C G A G T C G C T A A C T G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---DCBAHSGBAB-
ATTCCCAAGGGAAT
 A C G T A C G T A C G T C A G T A T G C A G T C C G T A G C T A A T G C T A C G A G T C G C T A A C T G A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-DCBAHSGBAB
TTCTNMGGAA-
 A C G T C A G T A T G C A G T C C G T A G C T A A T G C T A C G A G T C G C T A A C T G
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T