Information for 13-TTAGAAATTHCTDATT (Motif 22)

A C G T C G A T C T G A A T C G C G T A T G C A T C G A C G A T G A C T G C T A T G A C G A C T C A G T G T C A A G C T A C G T
Reverse Opposite:
G T C A T C G A C A G T G C T A C T G A A C T G C A G T C T G A C G T A A G C T A C G T G C A T A T G C G A C T C G T A G T C A
p-value:1e-4
log p-value:-1.111e+01
Information Content per bp:1.655
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets49.0 +/- 10.7bp
Average Position of motif in Background45.8 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0008.1_Barx2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTAGAAATTHCTDATT
TAAGTAATTAGTTATA
 A C G T C G A T C T G A A T C G C G T A T G C A T C G A C G A T G A C T G C T A T G A C G A C T C A G T G T C A A G C T A C G T
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A

PH0172.1_Tlx2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTAGAAATTHCTDATT-
TAATTAATTAATAACTA
 A C G T C G A T C T G A A T C G C G T A T G C A T C G A C G A T G A C T G C T A T G A C G A C T C A G T G T C A A G C T A C G T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTAGAAATTHCTDATT
--GGAAATTCCC----
 A C G T C G A T C T G A A T C G C G T A T G C A T C G A C G A T G A C T G C T A T G A C G A C T C A G T G T C A A G C T A C G T
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTAGAAATTHCTDATT
NNNGTAATTACNNATA
 A C G T C G A T C T G A A T C G C G T A T G C A T C G A C G A T G A C T G C T A T G A C G A C T C A G T G T C A A G C T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

PH0062.1_Hoxb7/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTAGAAATTHCTDATT
GTAGTAATTAATGCAA
 A C G T C G A T C T G A A T C G C G T A T G C A T C G A C G A T G A C T G C T A T G A C G A C T C A G T G T C A A G C T A C G T
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

Hoxd8/MA0910.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTAGAAATTHCTDATT-
TAAATAATTAATGGCTA
 A C G T C G A T C T G A A T C G C G T A T G C A T C G A C G A T G A C T G C T A T G A C G A C T C A G T G T C A A G C T A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTAGAAATTHCTDATT-
TAAATAATTAATGGCTA
 A C G T C G A T C T G A A T C G C G T A T G C A T C G A C G A T G A C T G C T A T G A C G A C T C A G T G T C A A G C T A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0018.1_Dbx1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTAGAAATTHCTDATT-
TAATTAATTAATAATTA
 A C G T C G A T C T G A A T C G C G T A T G C A T C G A C G A T G A C T G C T A T G A C G A C T C A G T G T C A A G C T A C G T A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

PH0071.1_Hoxc6/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTAGAAATTHCTDATT
CAAATTAATTAATAAAA
 A C G T A C G T C G A T C T G A A T C G C G T A T G C A T C G A C G A T G A C T G C T A T G A C G A C T C A G T G T C A A G C T A C G T
A G T C C T G A G C T A T C G A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A C G T C G T A T C G A T G C A C G T A

PH0007.1_Barx1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTAGAAATTHCTDATT
ATNNACTAATTACTTT--
 A C G T A C G T A C G T C G A T C T G A A T C G C G T A T G C A T C G A C G A T G A C T G C T A T G A C G A C T C A G T G T C A A G C T A C G T
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T A C G T A C G T