Information for 12-TCTCTCHCACHCACAC (Motif 20)

G C A T A T G C C G A T A G T C G C A T A G T C G A T C T A G C G C T A G T A C G A T C A T G C G T C A A G T C G T C A T G A C
Reverse Opposite:
A C T G C A G T T C A G C A G T T A C G C T A G C A T G C G A T A C T G C T A G T C A G C G T A T C A G G C T A T A C G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.574
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif1579.2
Percentage of Background Sequences with motif3.50%
Average Position of motif in Targets48.5 +/- 16.0bp
Average Position of motif in Background51.3 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCHCACHCACAC
CTGTCTGTCACCT----
 A C G T G C A T A T G C C G A T A G T C G C A T A G T C G A T C T A G C G C T A G T A C G A T C A T G C G T C A A G T C G T C A T G A C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCTCTCHCACHCACAC
TGTCTGDCACCT----
 G C A T A T G C C G A T A G T C G C A T A G T C G A T C T A G C G C T A G T A C G A T C A T G C G T C A A G T C G T C A T G A C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TCTCTCHCACHCACAC-
-------CRCCCACGCA
 G C A T A T G C C G A T A G T C G C A T A G T C G A T C T A G C G C T A G T A C G A T C A T G C G T C A A G T C G T C A T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCTCTCHCACHCACAC
NNAGTCCCACTCNNNN
 G C A T A T G C C G A T A G T C G C A T A G T C G A T C T A G C G C T A G T A C G A T C A T G C G T C A A G T C G T C A T G A C
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCTCTCHCACHCACAC-
---CCCCCGCCCCCGCC
 G C A T A T G C C G A T A G T C G C A T A G T C G A T C T A G C G C T A G T A C G A T C A T G C G T C A A G T C G T C A T G A C A C G T
A C G T A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCTCTCHCACHCACAC-
-----YCCGCCCACGCN
 G C A T A T G C C G A T A G T C G C A T A G T C G A T C T A G C G C T A G T A C G A T C A T G C G T C A A G T C G T C A T G A C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

SP3/MA0746.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TCTCTCHCACHCACAC
-----GCCACGCCCCC
 G C A T A T G C C G A T A G T C G C A T A G T C G A T C T A G C G C T A G T A C G A T C A T G C G T C A A G T C G T C A T G A C
A C G T A C G T A C G T A C G T A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TCTCTCHCACHCACAC
----CCCCTCCCCCAC
 G C A T A T G C C G A T A G T C G C A T A G T C G A T C T A G C G C T A G T A C G A T C A T G C G T C A A G T C G T C A T G A C
A C G T A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCTCTCHCACHCACAC
---GCCMCGCCCMCY-
 G C A T A T G C C G A T A G T C G C A T A G T C G A T C T A G C G C T A G T A C G A T C A T G C G T C A A G T C G T C A T G A C
A C G T A C G T A C G T T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCTCTCHCACHCACAC-
--TCCCCCCCCCCCCCC
 G C A T A T G C C G A T A G T C G C A T A G T C G A T C T A G C G C T A G T A C G A T C A T G C G T C A A G T C G T C A T G A C A C G T
A C G T A C G T C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C