Information for 5-AGASACAWTGWTM (Motif 12)

C T G A C T A G C G T A A T G C C T G A A G T C C G T A C G T A C G A T T A C G C G A T C G A T G T A C
Reverse Opposite:
C A T G C G T A G C T A A T G C C G T A G C A T A C G T T C A G A G C T T A C G C G A T A G T C G A C T
p-value:1e-6
log p-value:-1.537e+01
Information Content per bp:1.633
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif31.25%
Number of Background Sequences with motif397.2
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets43.0 +/- 30.7bp
Average Position of motif in Background49.1 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGASACAWTGWTM
----ACAAAG---
 C T G A C T A G C G T A A T G C C T G A A G T C C G T A C G T A C G A T T A C G C G A T C G A T G T A C
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGASACAWTGWTM
-AAAACAATGG--
 C T G A C T A G C G T A A T G C C T G A A G T C C G T A C G T A C G A T T A C G C G A T C G A T G T A C
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGASACAWTGWTM-
YDGHTACAWTGTADC
 A C G T C T G A C T A G C G T A A T G C C T G A A G T C C G T A C G T A C G A T T A C G C G A T C G A T G T A C A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGASACAWTGWTM-
TWGHWACAWTGTWDC
 A C G T C T G A C T A G C G T A A T G C C T G A A G T C C G T A C G T A C G A T T A C G C G A T C G A T G T A C A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGASACAWTGWTM
---GACAATGNN-
 C T G A C T A G C G T A A T G C C T G A A G T C C G T A C G T A C G A T T A C G C G A T C G A T G T A C
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGASACAWTGWTM
-VRRACAAWGG--
 C T G A C T A G C G T A A T G C C T G A A G T C C G T A C G T A C G A T T A C G C G A T C G A T G T A C
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGASACAWTGWTM-
AAACAGACAAAGGAAT
 A C G T A C G T C T G A C T A G C G T A A T G C C T G A A G T C C G T A C G T A C G A T T A C G C G A T C G A T G T A C A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGASACAWTGWTM
--RAACAATGGN-
 C T G A C T A G C G T A A T G C C T G A A G T C C G T A C G T A C G A T T A C G C G A T C G A T G T A C
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGASACAWTGWTM-
CTCACACAATGGCGC
 A C G T C T G A C T A G C G T A A T G C C T G A A G T C C G T A C G T A C G A T T A C G C G A T C G A T G T A C A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGASACAWTGWTM
-AAAACAAAGG--
 C T G A C T A G C G T A A T G C C T G A A G T C C G T A C G T A C G A T T A C G C G A T C G A T G T A C
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T