p-value: | 1e-6 |
log p-value: | -1.573e+01 |
Information Content per bp: | 1.701 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 18.75% |
Number of Background Sequences with motif | 29.7 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 84.3 +/- 3.4bp |
Average Position of motif in Background | 55.6 +/- 32.6bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TTVAATGACCTGABAG -----TGACCTYA--- |
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PB0169.1_Sox15_2/Jaspar
Match Rank: | 2 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTVAATGACCTGABAG TTGAATGAAATTCGA- |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 3 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTVAATGACCTGABAG- -NNNGTGACCTTTGNNN |
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PB0005.1_Bbx_1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TTVAATGACCTGABAG TAATTCAATGAAGTG---- |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | TTVAATGACCTGABAG-- --------VBTGWCAGCB |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTVAATGACCTGABAG- -NNNNTGACCTTTNNNN |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | TTVAATGACCTGABAG- ---------TTGACAGC |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TTVAATGACCTGABAG -----TGACCT----- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TTVAATGACCTGABAG ----GTGACCTT---- |
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PB0197.1_Zfp105_2/Jaspar
Match Rank: | 10 |
Score: | 0.49 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TTVAATGACCTGABAG ATGGTTCAATAATTTTG--- |
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