Information for 2-GCTTAATGAC (Motif 2)

A T C G A T G C A G C T G A C T C G T A C G T A A C G T A C T G C T G A A T G C
Reverse Opposite:
T A C G A G C T T G A C C G T A C G A T C G A T C T G A T C G A T A C G T A G C
p-value:1e-42
log p-value:-9.826e+01
Information Content per bp:1.706
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif11.49%
Number of Background Sequences with motif944.9
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets47.3 +/- 23.5bp
Average Position of motif in Background49.8 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX6-1/MA0674.1/Jaspar

Match Rank:1
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:GCTTAATGAC
--TTAATTAN
 A T C G A T G C A G C T G A C T C G T A C G T A A C G T A C T G C T G A A T G C
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

EMX1/MA0612.1/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:GCTTAATGAC-
-CCTAATTACC
 A T C G A T G C A G C T G A C T C G T A C G T A A C G T A C T G C T G A A T G C A C G T
A C G T T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GCTTAATGAC
-GKTAATGR-
 A T C G A T G C A G C T G A C T C G T A C G T A A C G T A C T G C T G A A T G C
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T

VAX2/MA0723.1/Jaspar

Match Rank:4
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GCTTAATGAC
--CTAATTAC
 A T C G A T G C A G C T G A C T C G T A C G T A A C G T A C T G C T G A A T G C
A C G T A C G T A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C

NKX6-2/MA0675.1/Jaspar

Match Rank:5
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:GCTTAATGAC
--TTAATTAN
 A T C G A T G C A G C T G A C T C G T A C G T A A C G T A C T G C T G A A T G C
A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

HOXB3/MA0903.1/Jaspar

Match Rank:6
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GCTTAATGAC-
-NNTAATTANN
 A T C G A T G C A G C T G A C T C G T A C G T A A C G T A C T G C T G A A T G C A C G T
A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

VAX1/MA0722.1/Jaspar

Match Rank:7
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GCTTAATGAC
--CTAATTAC
 A T C G A T G C A G C T G A C T C G T A C G T A A C G T A C T G C T G A A T G C
A C G T A C G T A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C

PDX1/MA0132.2/Jaspar

Match Rank:8
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:GCTTAATGAC
--CTAATTAN
 A T C G A T G C A G C T G A C T C G T A C G T A A C G T A C T G C T G A A T G C
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C

HOXB2/MA0902.1/Jaspar

Match Rank:9
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GCTTAATGAC-
-NNTAATTANN
 A T C G A T G C A G C T G A C T C G T A C G T A A C G T A C T G C T G A A T G C A C G T
A C G T A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GCTTAATGAC-
-NNTAATTANN
 A T C G A T G C A G C T G A C T C G T A C G T A A C G T A C T G C T G A A T G C A C G T
A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C