Information for 15-TGCAGAGCAATTA (Motif 17)

C A G T A T C G T G A C G C T A T C A G C G T A T C A G G T A C G T C A G C T A A G C T A C G T G C T A
Reverse Opposite:
C G A T G T C A C T G A C A G T A C G T A C T G A G T C G C A T A G T C C G A T A C T G T A G C G T C A
p-value:1e-11
log p-value:-2.632e+01
Information Content per bp:1.623
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif130.2
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets46.5 +/- 21.5bp
Average Position of motif in Background50.5 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0107.1_Msx2/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGCAGAGCAATTA-----
-GAAGACCAATTAGCGCT
 C A G T A T C G T G A C G C T A T C A G C G T A T C A G G T A C G T C A G C T A A G C T A C G T G C T A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

Nobox/MA0125.1/Jaspar

Match Rank:2
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:TGCAGAGCAATTA
-----ACCAATTA
 C A G T A T C G T G A C G C T A T C A G C G T A T C A G G T A C G T C A G C T A A G C T A C G T G C T A
A C G T A C G T A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A

Hmx1/MA0896.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGCAGAGCAATTA------
--ACAAGCAATTAATGAAT
 C A G T A T C G T G A C G C T A T C A G C G T A T C A G G T A C G T C A G C T A A G C T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGCAGAGCAATTA------
--ACAAGCAATTAATGAAT
 C A G T A T C G T G A C G C T A T C A G C G T A T C A G G T A C G T C A G C T A A G C T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

GBX2/MA0890.1/Jaspar

Match Rank:5
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TGCAGAGCAATTA--
-----ACCAATTAGC
 C A G T A T C G T G A C G C T A T C A G C G T A T C A G G T A C G T C A G C T A A G C T A C G T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A T G C G A T C T C G A T G C A A C G T A C G T G C T A T C A G A T G C

Msx3/MA0709.1/Jaspar

Match Rank:6
Score:0.69
Offset:6
Orientation:forward strand
Alignment:TGCAGAGCAATTA-
------CCAATTAA
 C A G T A T C G T G A C G C T A T C A G C G T A T C A G G T A C G T C A G C T A A G C T A C G T G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.69
Offset:6
Orientation:forward strand
Alignment:TGCAGAGCAATTA-
------CCAATTAA
 C A G T A T C G T G A C G C T A T C A G C G T A T C A G G T A C G T C A G C T A A G C T A C G T G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

MSX1/MA0666.1/Jaspar

Match Rank:8
Score:0.69
Offset:6
Orientation:forward strand
Alignment:TGCAGAGCAATTA-
------CCAATTAG
 C A G T A T C G T G A C G C T A T C A G C G T A T C A G G T A C G T C A G C T A A G C T A C G T G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

Dlx2/MA0885.1/Jaspar

Match Rank:9
Score:0.68
Offset:6
Orientation:forward strand
Alignment:TGCAGAGCAATTA-
------GCAATTAA
 C A G T A T C G T G A C G C T A T C A G C G T A T C A G G T A C G T C A G C T A A G C T A C G T G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A

Dlx4/MA0881.1/Jaspar

Match Rank:10
Score:0.68
Offset:6
Orientation:forward strand
Alignment:TGCAGAGCAATTA-
------CCAATTAC
 C A G T A T C G T G A C G C T A T C A G C G T A T C A G G T A C G T C A G C T A A G C T A C G T G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C