Information for 11-GTTTGGCAGAGGC (Motif 10)

A C T G A C G T A C G T A C G T A C T G A T C G T A G C C G T A A C T G G T C A A C T G A C T G A G T C
Reverse Opposite:
A C T G G T A C A G T C A C G T A G T C A C G T A T C G T A G C A G T C C G T A G T C A C G T A A G T C
p-value:1e-13
log p-value:-3.130e+01
Information Content per bp:1.846
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.4 +/- 24.9bp
Average Position of motif in Background70.2 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTTGGCAGAGGC
-CTTGGCAA----
 A C T G A C G T A C G T A C G T A C T G A T C G T A G C C G T A A C T G G T C A A C T G A C T G A G T C
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTTTGGCAGAGGC---
-ATTGCCTCAGGCAAT
 A C T G A C G T A C G T A C G T A C T G A T C G T A G C C G T A A C T G G T C A A C T G A C T G A G T C A C G T A C G T A C G T
A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTTGGCAGAGGC
NNTTGGCANN---
 A C T G A C G T A C G T A C G T A C T G A T C G T A G C C G T A A C T G G T C A A C T G A C T G A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTTTGGCAGAGGC
--TTGACAGC---
 A C T G A C G T A C G T A C G T A C T G A T C G T A G C C G T A A C T G G T C A A C T G A C T G A G T C
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTTTGGCAGAGGC
GTGGGGGAGGGG-
 A C T G A C G T A C G T A C G T A C T G A T C G T A G C C G T A A C T G G T C A A C T G A C T G A G T C
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTTTGGCAGAGGC
---TGGGTGTGGC
 A C T G A C G T A C G T A C G T A C T G A T C G T A G C C G T A A C T G G T C A A C T G A C T G A G T C
A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTTTGGCAGAGGC
--TTGGCA-----
 A C T G A C G T A C G T A C G T A C T G A T C G T A G C C G T A A C T G G T C A A C T G A C T G A G T C
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTTTGGCAGAGGC
-NTTGGCANN---
 A C T G A C G T A C G T A C G T A C T G A T C G T A G C C G T A A C T G G T C A A C T G A C T G A G T C
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTTTGGCAGAGGC--
GATATTGACAGCTGCGT
 A C G T A C G T A C T G A C G T A C G T A C G T A C T G A T C G T A G C C G T A A C T G G T C A A C T G A C T G A G T C A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GTTTGGCAGAGGC-
---TGCCTGAGGCN
 A C T G A C G T A C G T A C G T A C T G A T C G T A G C C G T A A C T G G T C A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T