Information for 6-TTGGGAACTGTGCTTG (Motif 4)

A G C T C G A T A C T G A C T G A C T G C G T A C T G A A G T C A G C T A C T G C G A T A T C G A G T C A G C T A C G T A C T G
Reverse Opposite:
G T A C G T C A C T G A A C T G A T G C C G T A A G T C C T G A A C T G A G C T A C G T A G T C A G T C A G T C C G T A C T G A
p-value:1e-21
log p-value:-4.836e+01
Information Content per bp:1.908
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 12.3bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTGGGAACTGTGCTTG
--GGGAATTGTAGT--
 A G C T C G A T A C T G A C T G A C T G C G T A C T G A A G T C A G C T A C T G C G A T A T C G A G T C A G C T A C G T A C T G
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TTGGGAACTGTGCTTG-
-------CTGTTCCTGG
 A G C T C G A T A C T G A C T G A C T G C G T A C T G A A G T C A G C T A C T G C G A T A T C G A G T C A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTGGGAACTGTGCTTG
GCATTCTGGGAATTGTAGTT-
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T A C T G A C T G A C T G C G T A C T G A A G T C A G C T A C T G C G A T A T C G A G T C A G C T A C G T A C T G
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTGGGAACTGTGCTTG
GCMTBCTGGGAGTTGTAGTY-
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T A C T G A C T G A C T G C G T A C T G A A G T C A G C T A C T G C G A T A T C G A G T C A G C T A C G T A C T G
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGAACTGTGCTTG
CSTGGGAAAD-------
 A C G T A G C T C G A T A C T G A C T G A C T G C G T A C T G A A G T C A G C T A C T G C G A T A T C G A G T C A G C T A C G T A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TTGGGAACTGTGCTTG
--TGGAACAGMA----
 A G C T C G A T A C T G A C T G A C T G C G T A C T G A A G T C A G C T A C T G C G A T A T C G A G T C A G C T A C G T A C T G
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TTGGGAACTGTGCTTG--
--------TGACCTTGAV
 A G C T C G A T A C T G A C T G A C T G C G T A C T G A A G T C A G C T A C T G C G A T A T C G A G T C A G C T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TTGGGAACTGTGCTTG--
--------TGACCTTGAN
 A G C T C G A T A C T G A C T G A C T G C G T A C T G A A G T C A G C T A C T G C G A T A T C G A G T C A G C T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TTGGGAACTGTGCTTG-------
---GGAGCTGTCCATGGTGCTGA
 A G C T C G A T A C T G A C T G A C T G C G T A C T G A A G T C A G C T A C T G C G A T A T C G A G T C A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TTGGGAACTGTGCTTG
------BNTGDCCTTG
 A G C T C G A T A C T G A C T G A C T G C G T A C T G A A G T C A G C T A C T G C G A T A T C G A G T C A G C T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G