Information for 3-TATGTAATTATTA (Motif 8)

C G A T G T C A C A G T A C T G C G A T G T C A G C T A A C G T C G A T C T G A A G C T A C G T T C G A
Reverse Opposite:
A C G T C G T A C T G A A G C T C G T A C G T A C A G T A C G T C G T A T G A C G C T A C A G T C G T A
p-value:1e-5
log p-value:-1.275e+01
Information Content per bp:1.713
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.59%
Number of Background Sequences with motif208.8
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets49.0 +/- 22.6bp
Average Position of motif in Background49.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.76
Offset:5
Orientation:reverse strand
Alignment:TATGTAATTATTA
-----AATTATT-
 C G A T G T C A C A G T A C T G C G A T G T C A G C T A A C G T C G A T C T G A A G C T A C G T T C G A
A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

PH0143.1_Pou2f1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TATGTAATTATTA---
TACTTAATTAATNNAN
 C G A T G T C A C A G T A C T G C G A T G T C A G C T A A C G T C G A T C T G A A G C T A C G T T C G A A C G T A C G T A C G T
G C A T C G T A T G A C G A C T C G A T G T C A C G T A C G A T A C G T C G T A C G T A G A C T C G T A G A C T C T G A G A C T

PH0018.1_Dbx1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TATGTAATTATTA----
TAATTAATTAATAATTA
 C G A T G T C A C A G T A C T G C G A T G T C A G C T A A C G T C G A T C T G A A G C T A C G T T C G A A C G T A C G T A C G T A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

PH0023.1_Dlx4/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TATGTAATTATTA---
GTCGGTAATTATNGNGN
 A C G T C G A T G T C A C A G T A C T G C G A T G T C A G C T A A C G T C G A T C T G A A G C T A C G T T C G A A C G T A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PH0008.1_Barx2/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TATGTAATTATTA---
TAAGTAATTAGTTATA
 C G A T G T C A C A G T A C T G C G A T G T C A G C T A A C G T C G A T C T G A A G C T A C G T T C G A A C G T A C G T A C G T
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A

PH0071.1_Hoxc6/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TATGTAATTATTA--
NNTNATTAATTAATTTG
 A C G T A C G T C G A T G T C A C A G T A C T G C G A T G T C A G C T A A C G T C G A T C T G A A G C T A C G T T C G A A C G T A C G T
G C A T A C G T A G C T G C A T T G C A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A G C T C G A T G A C T T C A G

Hoxd8/MA0910.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TATGTAATTATTA----
TAAATAATTAATGGCTA
 C G A T G T C A C A G T A C T G C G A T G T C A G C T A A C G T C G A T C T G A A G C T A C G T T C G A A C G T A C G T A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TATGTAATTATTA----
TAAATAATTAATGGCTA
 C G A T G T C A C A G T A C T G C G A T G T C A G C T A A C G T C G A T C T G A A G C T A C G T T C G A A C G T A C G T A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0022.1_Dlx3/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TATGTAATTATTA---
NNNGGTAATTATNGNGN
 A C G T C G A T G T C A C A G T A C T G C G A T G T C A G C T A A C G T C G A T C T G A A G C T A C G T T C G A A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PH0062.1_Hoxb7/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TATGTAATTATTA-
TNNCATTAATTANTNC
 A C G T A C G T C G A T G T C A C A G T A C T G C G A T G T C A G C T A A C G T C G A T C T G A A G C T A C G T T C G A A C G T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C