Information for 2-TCCTCTGCTC (Motif 4)

A C G T A G T C A G T C A C G T A G T C C G A T C T A G A G T C A G C T A G T C
Reverse Opposite:
A C T G C T G A A C T G A G T C C G T A C T A G C G T A C T A G C T A G C G T A
p-value:1e-8
log p-value:-1.872e+01
Information Content per bp:1.868
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif8.79%
Number of Background Sequences with motif211.1
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets43.8 +/- 26.9bp
Average Position of motif in Background48.9 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCTGCTC
TTCCTCT----
 A C G T A C G T A G T C A G T C A C G T A G T C C G A T C T A G A G T C A G C T A G T C
C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCTGCTC--
TGACCTTTGCCCTA
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G A T C T A G A G T C A G C T A G T C A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCCTCTGCTC----
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G A T C T A G A G T C A G C T A G T C A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCCTCTGCTC----
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G A T C T A G A G T C A G C T A G T C A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCTGCTC---
TGACCTTTGCCCTAN
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G A T C T A G A G T C A G C T A G T C A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCTCTGCTC--
TGACCTTTGCCCCA
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G A T C T A G A G T C A G C T A G T C A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCCTCTGCTC----
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G A T C T A G A G T C A G C T A G T C A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCCTCTGCTC----
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G A T C T A G A G T C A G C T A G T C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCCTCTGCTC
CACTTCCTCT----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G A T C T A G A G T C A G C T A G T C
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCCTCTGCTC----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G A T C T A G A G T C A G C T A G T C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T