Information for 6-GTGTCTTAATCTT (Motif 9)

T A C G A C G T C T A G G A C T A T G C C G A T A G C T G C T A T C G A C G A T A G T C C A G T C G A T
Reverse Opposite:
C G T A G T C A A C T G C G T A A C G T C A G T C T G A G C T A T A C G C T G A A G T C C G T A A T G C
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.764
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.7 +/- 28.2bp
Average Position of motif in Background50.3 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX2/MA0712.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GTGTCTTAATCTT
-----TTAATCCT
 T A C G A C G T C T A G G A C T A T G C C G A T A G C T G C T A T C G A C G A T A G T C C A G T C G A T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GTGTCTTAATCTT-
----NYTAATCCYB
 T A C G A C G T C T A G G A C T A T G C C G A T A G C T G C T A T C G A C G A T A G T C C A G T C G A T A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTGTCTTAATCTT
-----YTAATCCY
 T A C G A C G T C T A G G A C T A T G C C G A T A G C T G C T A T C G A C G A T A G T C C A G T C G A T
A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GTGTCTTAATCTT
-----TTAATCCG
 T A C G A C G T C T A G G A C T A T G C C G A T A G C T G C T A T C G A C G A T A G T C C A G T C G A T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GTGTCTTAATCTT
-----TTAATCCC
 T A C G A C G T C T A G G A C T A T G C C G A T A G C T G C T A T C G A C G A T A G T C C A G T C G A T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGTCTTAATCTT
----GCTAATCC-
 T A C G A C G T C T A G G A C T A T G C C G A T A G C T G C T A T C G A C G A T A G T C C A G T C G A T
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGTCTTAATCTT-
----CCTAATCCGC
 T A C G A C G T C T A G G A C T A T G C C G A T A G C T G C T A T C G A C G A T A G T C C A G T C G A T A C G T
A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GTGTCTTAATCTT-----
----NNTAATCCNGNCNN
 T A C G A C G T C T A G G A C T A T G C C G A T A G C T G C T A T C G A C G A T A G T C C A G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GTGTCTTAATCTT
----CTTAATCCC
 T A C G A C G T C T A G G A C T A T G C C G A T A G C T G C T A T C G A C G A T A G T C C A G T C G A T
A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GTGTCTTAATCTT-
----GCTAATCCCC
 T A C G A C G T C T A G G A C T A T G C C G A T A G C T G C T A T C G A C G A T A G T C C A G T C G A T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C