Information for 3-YYTTTGCTGCCAK (Motif 7)

A G C T A G C T A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A C A G T
Reverse Opposite:
G T A C A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A T C G A C T G A
p-value:1e-10
log p-value:-2.305e+01
Information Content per bp:1.890
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.5 +/- 30.5bp
Average Position of motif in Background65.9 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0041.1_Mafb_1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-YYTTTGCTGCCAK---
AAATTTGCTGACTTAGA
 A C G T A G C T A G C T A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A C A G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:YYTTTGCTGCCAK-
------TTGCCAAG
 A G C T A G C T A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:YYTTTGCTGCCAK
AATTTGCTGAC--
 A G C T A G C T A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A C A G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:YYTTTGCTGCCAK--
-TTTTCCCGCCAAAA
 A G C T A G C T A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A C A G T A C G T A C G T
A C G T C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

E2F8/MA0865.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:YYTTTGCTGCCAK-
--TTTCCCGCCAAA
 A G C T A G C T A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A C A G T A C G T
A C G T A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:YYTTTGCTGCCAK-
-----CGTGCCAAG
 A G C T A G C T A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A C A G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:YYTTTGCTGCCAK
-------TGCCAA
 A G C T A G C T A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:YYTTTGCTGCCAK
-TTTTCGCGCGAA
 A G C T A G C T A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A C A G T
A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:YYTTTGCTGCCAK
-----GCTGTCAA
 A G C T A G C T A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A C A G T
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:YYTTTGCTGCCAK--
------CTGCCCGCA
 A G C T A G C T A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A