Information for 8-CTRGMYSTCASTA (Motif 15)

A G T C A C G T C T A G A C T G G T C A G A C T A T G C A C G T G T A C C G T A A T C G A C G T C G T A
Reverse Opposite:
A C G T G T C A A T G C A C G T A C T G C G T A A T C G C T A G A C G T A G T C A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.389e+01
Information Content per bp:1.829
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.6 +/- 32.6bp
Average Position of motif in Background59.8 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTRGMYSTCASTA--
NNNCAGCTGTCAATATN
 A C G T A C G T A G T C A C G T C T A G A C T G G T C A G A C T A T G C A C G T G T A C C G T A A T C G A C G T C G T A A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0170.1_Tgif2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTRGMYSTCASTA-
AACTAGCTGTCAATAC
 A C G T A C G T A G T C A C G T C T A G A C T G G T C A G A C T A T G C A C G T G T A C C G T A A T C G A C G T C G T A A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTRGMYSTCASTA-
----AGCTCATTAT
 A G T C A C G T C T A G A C T G G T C A G A C T A T G C A C G T G T A C C G T A A T C G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTRGMYSTCASTA
GSCTGTCACTCA---
 A C G T A C G T A G T C A C G T C T A G A C T G G T C A G A C T A T G C A C G T G T A C C G T A A T C G A C G T C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTRGMYSTCASTA-----
-NNNACCTCATTATCNTN
 A G T C A C G T C T A G A C T G G T C A G A C T A T G C A C G T G T A C C G T A A T C G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTRGMYSTCASTA-----
-GCAACCTCATTATNNNN
 A G T C A C G T C T A G A C T G G T C A G A C T A T G C A C G T G T A C C G T A A T C G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTRGMYSTCASTA
NCTGTCAATCAN--
 A C G T A G T C A C G T C T A G A C T G G T C A G A C T A T G C A C G T G T A C C G T A A T C G A C G T C G T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTRGMYSTCASTA
--TGACGTCA---
 A G T C A C G T C T A G A C T G G T C A G A C T A T G C A C G T G T A C C G T A A T C G A C G T C G T A
A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTRGMYSTCASTA-
AACGAGCTGTCAATAC
 A C G T A C G T A G T C A C G T C T A G A C T G G T C A G A C T A T G C A C G T G T A C C G T A A T C G A C G T C G T A A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTRGMYSTCASTA-
AATTACCTGTCAATAC
 A C G T A C G T A G T C A C G T C T A G A C T G G T C A G A C T A T G C A C G T G T A C C G T A A T C G A C G T C G T A A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C