Information for 1-GAAGTACAAGTGCAGA (Motif 1)

C T A G C G T A C G T A A C T G G C A T C G T A G T A C C G T A C G T A C A T G A C G T A C T G A G T C C G T A C T A G C T G A
Reverse Opposite:
A G C T G A T C C G A T A C T G G T A C G T C A G A T C G C A T A C G T A C T G C G A T C G T A G T A C A C G T G A C T G A T C
p-value:1e-12
log p-value:-2.953e+01
Information Content per bp:1.705
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif3.10%
Number of Background Sequences with motif27.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets40.4 +/- 23.6bp
Average Position of motif in Background53.5 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0042.1_Mafk_1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAAGTACAAGTGCAGA---
----TAAAAATGCTGACTT
 C T A G C G T A C G T A A C T G G C A T C G T A G T A C C G T A C G T A C A T G A C G T A C T G A G T C C G T A C T A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GAAGTACAAGTGCAGA----
-----AAAWWTGCTGACWWD
 C T A G C G T A C G T A A C T G G C A T C G T A G T A C C G T A C G T A C A T G A C G T A C T G A G T C C G T A C T A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

SOX4/MA0867.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAAGTACAAGTGCAGA---
---GAACAATTGCAGTGTT
 C T A G C G T A C G T A A C T G G C A T C G T A G T A C C G T A C G T A C A T G A C G T A C T G A G T C C G T A C T A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAGTACAAGTGCAGA
-AAGTTCAAGGTCAGC
 C T A G C G T A C G T A A C T G G C A T C G T A G T A C C G T A C G T A C A T G A C G T A C T G A G T C C G T A C T A G C T G A
A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAAGTACAAGTGCAGA------
-----AAATTTGCTGACTTAGA
 C T A G C G T A C G T A A C T G G C A T C G T A G T A C C G T A C G T A C A T G A C G T A C T G A G T C C G T A C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

MAFF/MA0495.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GAAGTACAAGTGCAGA------
----NAAAANTGCTGACTCAGC
 C T A G C G T A C G T A A C T G G C A T C G T A G T A C C G T A C G T A C A T G A C G T A C T G A G T C C G T A C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAAGTACAAGTGCAGA-
--GAAAAAATTGCAAGG
 C T A G C G T A C G T A A C T G G C A T C G T A G T A C C G T A C G T A C A T G A C G T A C T G A G T C C G T A C T A G C T G A A C G T
A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAAGTACAAGTGCAGA
AAAAATAACAAACGG---
 A C G T A C G T C T A G C G T A C G T A A C T G G C A T C G T A G T A C C G T A C G T A C A T G A C G T A C T G A G T C C G T A C T A G C T G A
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GAAGTACAAGTGCAGA--
------AAAATGCTGACT
 C T A G C G T A C G T A A C T G G C A T C G T A G T A C C G T A C G T A C A T G A C G T A C T G A G T C C G T A C T A G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAAGTACAAGTGCAGA
--AGGTCAAGGTCA--
 C T A G C G T A C G T A A C T G G C A T C G T A G T A C C G T A C G T A C A T G A C G T A C T G A G T C C G T A C T A G C T G A
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T