Information for 4-GYGTTYTSTGKGG (Motif 7)

A C T G A G T C A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G C A G T A C T G A C T G
Reverse Opposite:
A G T C A G T C G T C A A G T C C G T A A T C G C G T A C T A G C T G A C G T A G T A C C T A G A G T C
p-value:1e-10
log p-value:-2.449e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.3 +/- 24.9bp
Average Position of motif in Background47.0 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GYGTTYTSTGKGG---
-----GTCTGTGGTTT
 A C T G A G T C A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G C A G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GYGTTYTSTGKGG
---TTTTATKRGG
 A C T G A G T C A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G C A G T A C T G A C T G
A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GYGTTYTSTGKGG----
-----NNHTGTGGTTWN
 A C T G A G T C A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G C A G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GYGTTYTSTGKGG---
------GCTGTGGTTT
 A C T G A G T C A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G C A G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GYGTTYTSTGKGG---
------NNTGTGGTTT
 A C T G A G T C A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G C A G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GYGTTYTSTGKGG----
-------CTGTGGTTTN
 A C T G A G T C A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G C A G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GYGTTYTSTGKGG
--NTTTTATTGG-
 A C T G A G T C A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G C A G T A C T G A C T G
A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GYGTTYTSTGKGG---
------TTTGCGGTTT
 A C T G A G T C A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G C A G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GYGTTYTSTGKGG--
NNTGTTTATTTTGGCA
 A C G T A C T G A G T C A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G C A G T A C T G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GYGTTYTSTGKGG
--NTTTTATTGG-
 A C T G A G T C A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G C A G T A C T G A C T G
A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T