Information for 2-AVAGACGCGGCTG (Motif 2)

C G T A T A C G C G T A A C T G C G T A A G T C T A C G A G T C A C T G A T C G A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G A T G C A G T C C T A G A G T C A C T G A C G T A G T C A C G T A G T C A C G T
p-value:1e-11
log p-value:-2.587e+01
Information Content per bp:1.866
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.7 +/- 25.2bp
Average Position of motif in Background43.9 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AVAGACGCGGCTG
AGCAACAGCCGCACC--
 A C G T A C G T A C G T A C G T C G T A T A C G C G T A A C T G C G T A A G T C T A C G A G T C A C T G A T C G A G T C A C G T A C T G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AVAGACGCGGCTG-
CAAAGGCGTGGCCAG
 A C G T C G T A T A C G C G T A A C T G C G T A A G T C T A C G A G T C A C T G A T C G A G T C A C G T A C T G A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Creb3l2/MA0608.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AVAGACGCGGCTG
--ACACGTGGC--
 C G T A T A C G C G T A A C T G C G T A A G T C T A C G A G T C A C T G A T C G A G T C A C G T A C T G
A C G T A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AVAGACGCGGCTG
CCAGACRSVB---
 C G T A T A C G C G T A A C T G C G T A A G T C T A C G A G T C A C T G A T C G A G T C A C G T A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AVAGACGCGGCTG
TGATGACGTGGCAN
 A C G T C G T A T A C G C G T A A C T G C G T A A G T C T A C G A G T C A C T G A T C G A G T C A C G T A C T G
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

CREB3/MA0638.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AVAGACGCGGCTG
NGATGACGTGGCAN
 A C G T C G T A T A C G C G T A A C T G C G T A A G T C T A C G A G T C A C T G A T C G A G T C A C G T A C T G
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

HEY1/MA0823.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AVAGACGCGGCTG
-GACACGTGCC--
 C G T A T A C G C G T A A C T G C G T A A G T C T A C G A G T C A C T G A T C G A G T C A C G T A C T G
A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AVAGACGCGGCTG
-GGCACGTGNC--
 C G T A T A C G C G T A A C T G C G T A A G T C T A C G A G T C A C T G A T C G A G T C A C G T A C T G
A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AVAGACGCGGCTG-
GATGACGTGGCANT
 C G T A T A C G C G T A A C T G C G T A A G T C T A C G A G T C A C T G A T C G A G T C A C G T A C T G A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AVAGACGCGGCTG
--GGACGTGC---
 C G T A T A C G C G T A A C T G C G T A A G T C T A C G A G T C A C T G A T C G A G T C A C G T A C T G
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T