Information for 9-CGAAGGAGCGAAG (Motif 17)

A T G C A C T G C T G A C G T A A C T G A C T G C G T A A C T G A G T C A C T G G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C C T A G A G T C A C G T A G T C A G T C A C G T A G C T A G T C A T C G
p-value:1e-8
log p-value:-1.949e+01
Information Content per bp:1.913
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 11.1bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGAAGGAGCGAAG
--AAGGTGTGAA-
 A T G C A C T G C T G A C G T A A C T G A C T G C G T A A C T G A G T C A C T G G T C A C G T A A C T G
A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGAAGGAGCGAAG
--TAGGTGTGAAG
 A T G C A C T G C T G A C G T A A C T G A C T G C G T A A C T G A G T C A C T G G T C A C G T A A C T G
A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGAAGGAGCGAAG-----
GGAAGGAAGGAAGGAAGG
 A T G C A C T G C T G A C G T A A C T G A C T G C G T A A C T G A G T C A C T G G T C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGAAGGAGCGAAG
--AAGGTGTKAA-
 A T G C A C T G C T G A C G T A A C T G A C T G C G T A A C T G A G T C A C T G G T C A C G T A A C T G
A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGAAGGAGCGAAG--
--AAGGTGTGAAAAT
 A T G C A C T G C T G A C G T A A C T G A C T G C G T A A C T G A G T C A C T G G T C A C G T A A C T G A C G T A C G T
A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGAAGGAGCGAAG
---AGGTGTGAAA
 A T G C A C T G C T G A C G T A A C T G A C T G C G T A A C T G A G T C A C T G G T C A C G T A A C T G
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGAAGGAGCGAAG---
GAAAAGGTGTGAAAATT
 A C G T A T G C A C T G C T G A C G T A A C T G A C T G C G T A A C T G A G T C A C T G G T C A C G T A A C T G A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGAAGGAGCGAAG
---CGGAGC----
 A T G C A C T G C T G A C G T A A C T G A C T G C G T A A C T G A G T C A C T G G T C A C G T A A C T G
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGAAGGAGCGAAG
--AAGGTGTGAAA
 A T G C A C T G C T G A C G T A A C T G A C T G C G T A A C T G A G T C A C T G G T C A C G T A A C T G
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CGAAGGAGCGAAG
---AGGTGTGA--
 A T G C A C T G C T G A C G T A A C T G A C T G C G T A A C T G A G T C A C T G G T C A C G T A A C T G
A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T