Information for 5-TTACCACGGC (Motif 13)

A G C T A G C T G C T A T A G C A T G C G C T A A G T C A C T G A T C G G A T C
Reverse Opposite:
C T A G T A G C T G A C T C A G C G A T A T C G A T C G C G A T T C G A T C G A
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.660
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif7.76%
Number of Background Sequences with motif1597.5
Percentage of Background Sequences with motif3.35%
Average Position of motif in Targets49.9 +/- 26.9bp
Average Position of motif in Background50.1 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTACCACGGC
HTTTCCCASG--
 A C G T A C G T A G C T A G C T G C T A T A G C A T G C G C T A A G T C A C T G A T C G G A T C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTACCACGGC--
NGTTGCCATGGCAA
 A C G T A C G T A G C T A G C T G C T A T A G C A T G C G C T A A G T C A C T G A T C G G A T C A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTACCACGGC--
GGTTGCCATGGCAA
 A C G T A C G T A G C T A G C T G C T A T A G C A T G C G C T A A G T C A C T G A T C G G A T C A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTACCACGGC
AAACCACAGC
 A G C T A G C T G C T A T A G C A T G C G C T A A G T C A C T G A T C G G A T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTACCACGGC----
GTTGCCATGGCAACM
 A C G T A G C T A G C T G C T A T A G C A T G C G C T A A G T C A C T G A T C G G A T C A C G T A C G T A C G T A C G T
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTACCACGGC
ATTTTCCATT--
 A C G T A C G T A G C T A G C T G C T A T A G C A T G C G C T A A G T C A C T G A T C G G A T C
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTACCACGGC---
CGGTTGCCATGGCAAC
 A C G T A C G T A C G T A G C T A G C T G C T A T A G C A T G C G C T A A G T C A C T G A T C G G A T C A C G T A C G T A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

RFX5/MA0510.2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTACCACGGC----
NGTTGCCATGGCAACG
 A C G T A C G T A G C T A G C T G C T A T A G C A T G C G C T A A G T C A C T G A T C G G A T C A C G T A C G T A C G T A C G T
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTACCACGGC---
GTTGCCATGGNAAC
 A C G T A G C T A G C T G C T A T A G C A T G C G C T A A G T C A C T G A T C G G A T C A C G T A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

RFX3/MA0798.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTACCACGGC----
CGTTGCCATGGCAACN
 A C G T A C G T A G C T A G C T G C T A T A G C A T G C G C T A A G T C A C T G A T C G G A T C A C G T A C G T A C G T A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G