Information for 13-AAAAAAATAA (Motif 24)

G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G A T G T C A G T C A
Reverse Opposite:
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T C A G T A C G T
p-value:1e-2
log p-value:-6.394e+00
Information Content per bp:1.837
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif259.0
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets50.8 +/- 22.5bp
Average Position of motif in Background47.6 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAATAA---
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G A T G T C A G T C A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAATAA
TACTGGAAAAAAAA-
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G A T G T C A G T C A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAATAA---
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A C G T G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G A T G T C A G T C A A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAATAA--
ATGCTAAAAATAGAA
 A C G T A C G T A C G T G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G A T G T C A G T C A A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAATAA---
AACAAACAACAAGAG
 A C G T A C G T G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G A T G T C A G T C A A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AAAAAAATAA-
DCYAAAAATAGM
 A C G T G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G A T G T C A G T C A A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAAAAAATAA--
AAACAAACATTC
 G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G A T G T C A G T C A A C G T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAAATAA-
GCTAAAAATAGC
 A C G T G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G A T G T C A G T C A A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

PB0186.1_Tcf3_2/Jaspar

Match Rank:9
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------AAAAAAATAA
AGCCGAAAAAAAAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G A T G T C A G T C A
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAATAA-
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G A T G T C A G T C A A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A