Information for 7-CTCCGTCTGC (Motif 18)

A G T C A C G T A G T C A G T C A C T G A C G T A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G C G T A A C T G
p-value:1e-6
log p-value:-1.397e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.8 +/- 6.8bp
Average Position of motif in Background46.8 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTCCGTCTGC
VBSYGTCTGG
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C A C G T A C T G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CTCCGTCTGC
--CTGTCTGG
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCCGTCTGC--
CAACGTCCGCGG
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTCCGTCTGC
GCTCCG-----
 A C G T A G T C A C G T A G T C A G T C A C T G A C G T A G T C A C G T A C T G A G T C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTCCGTCTGC-
-GCCATCTGTT
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCCGTCTGC-----
GGGCCGTGTGCAAAAA
 A C G T A G T C A C G T A G T C A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCCGTCTGC-
-ACCATCTGTT
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C G T
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCCGTCTGC
--TWGTCTGV
 A G T C A C G T A G T C A G T C A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGTCTGC-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGTCTGC-
GCTCCGCCCMCY
 A C G T A G T C A C G T A G T C A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T