Information for 2-CTCMTCWGTCAGC (Motif 5)

A T G C A C G T A T G C T G C A A C G T A G T C C G A T A C T G A C G T A T G C C G T A A C T G A T G C
Reverse Opposite:
A T C G T G A C A C G T A T C G C G T A T G A C G C T A A C T G C G T A A C G T A T C G G T C A A T C G
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.779
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif25.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.2 +/- 29.1bp
Average Position of motif in Background42.5 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CTCMTCWGTCAGC-
----TGAGTCAGCA
 A T G C A C G T A T G C T G C A A C G T A G T C C G A T A C T G A C G T A T G C C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CTCMTCWGTCAGC
-----NTGTCAN-
 A T G C A C G T A T G C T G C A A C G T A G T C C G A T A C T G A C G T A T G C C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTCMTCWGTCAGC
-TCATCAATCA--
 A T G C A C G T A T G C T G C A A C G T A G T C C G A T A C T G A C G T A T G C C G T A A C T G A T G C
A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCMTCWGTCAGC
RGCCATYAATCA--
 A C G T A T G C A C G T A T G C T G C A A C G T A G T C C G A T A C T G A C G T A T G C C G T A A C T G A T G C
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTCMTCWGTCAGC---
----SCTGTCARCACC
 A T G C A C G T A T G C T G C A A C G T A G T C C G A T A C T G A C G T A T G C C G T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCMTCWGTCAGC
GYCATCMATCAT-
 A T G C A C G T A T G C T G C A A C G T A G T C C G A T A C T G A C G T A T G C C G T A A C T G A T G C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTCMTCWGTCAGC
----TGAGTCA--
 A T G C A C G T A T G C T G C A A C G T A G T C C G A T A C T G A C G T A T G C C G T A A C T G A T G C
A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CTCMTCWGTCAGC-----
------NGTCAGCANTTT
 A T G C A C G T A T G C T G C A A C G T A G T C C G A T A C T G A C G T A T G C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTCMTCWGTCAGC
----GCTGTCAA-
 A T G C A C G T A T G C T G C A A C G T A G T C C G A T A C T G A C G T A T G C C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCMTCWGTCAGC
-TGCTGASTCAGC
 A T G C A C G T A T G C T G C A A C G T A G T C C G A T A C T G A C G T A T G C C G T A A C T G A T G C
A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C