Information for 3-GMAAGGCCCAGGCCTC (Motif 4)

A C T G T G C A C G T A C T G A A C T G C T A G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G C T A G T C
Reverse Opposite:
A C T G C T G A C T A G A C T G G T A C G T A C G C A T C T A G A C T G A C T G A G T C A G T C A G C T A C G T A C G T A G T C
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.821
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 23.9bp
Average Position of motif in Background44.8 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GMAAGGCCCAGGCCTC
--CAGGCCNNGGCCNN
 A C T G T G C A C G T A C T G A A C T G C T A G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G C T A G T C
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GMAAGGCCCAGGCCTC
-------CNAGGCCT-
 A C T G T G C A C G T A C T G A A C T G C T A G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GMAAGGCCCAGGCCTC
---AGGCCTAG-----
 A C T G T G C A C G T A C T G A A C T G C T A G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G C T A G T C
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GMAAGGCCCAGGCCTC
----GGCCCCGCCCCC
 A C T G T G C A C G T A C T G A A C T G C T A G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G C T A G T C
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GMAAGGCCCAGGCCTC
-ACATGCCCGGGCAT-
 A C T G T G C A C G T A C T G A A C T G C T A G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G C T A G T C
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GMAAGGCCCAGGCCTC
--AAGACCCYYN----
 A C T G T G C A C G T A C T G A A C T G C T A G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G C T A G T C
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GMAAGGCCCAGGCCTC
GGAAATCCCC-------
 A C G T A C T G T G C A C G T A C T G A A C T G C T A G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G C T A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GMAAGGCCCAGGCCTC
----TGCCCAGNHW--
 A C T G T G C A C G T A C T G A A C T G C T A G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G C T A G T C
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GMAAGGCCCAGGCCTC
-CAAGGHCANV-----
 A C T G T G C A C G T A C T G A A C T G C T A G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G C T A G T C
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GMAAGGCCCAGGCCTC
---TGACCTTGACCT-
 A C T G T G C A C G T A C T G A A C T G C T A G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G C T A G T C
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T