Information for 1-AGATCCAGGAGAC (Motif 2)

C G T A A C T G C T G A A C G T A T G C A G T C C G T A A C T G A C T G C G T A A C T G T C G A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T C G C G T A A G C T A G T C A C G T
p-value:1e-11
log p-value:-2.537e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 20.4bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGATCCAGGAGAC
AGGTCAAGGTCA-
 C G T A A C T G C T G A A C G T A T G C A G T C C G T A A C T G A C T G C G T A A C T G T C G A A G T C
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGATCCAGGAGAC
-GRTGMTRGAGCC
 C G T A A C T G C T G A A C G T A T G C A G T C C G T A A C T G A C T G C G T A A C T G T C G A A G T C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AGATCCAGGAGAC
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A A C G T A T G C A G T C C G T A A C T G A C T G C G T A A C T G T C G A A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGATCCAGGAGAC
---ANCAGGATGT
 C G T A A C T G C T G A A C G T A T G C A G T C C G T A A C T G A C T G C G T A A C T G T C G A A G T C
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGATCCAGGAGAC
---NNCAGGTGNN
 C G T A A C T G C T G A A C G T A T G C A G T C C G T A A C T G A C T G C G T A A C T G T C G A A G T C
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGATCCAGGAGAC-----
-NTNNNAGGAGTCTCNTN
 C G T A A C T G C T G A A C G T A T G C A G T C C G T A A C T G A C T G C G T A A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGATCCAGGAGAC
AGGTCAAGGTCA-
 C G T A A C T G C T G A A C G T A T G C A G T C C G T A A C T G A C T G C G T A A C T G T C G A A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGATCCAGGAGAC---
-TTTCCTGGAAAGNNN
 C G T A A C T G C T G A A C G T A T G C A G T C C G T A A C T G A C T G C G T A A C T G T C G A A G T C A C G T A C G T A C G T
A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGATCCAGGAGAC
AAAGATCAAAGGGTT
 A C G T A C G T C G T A A C T G C T G A A C G T A T G C A G T C C G T A A C T G A C T G C G T A A C T G T C G A A G T C
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGATCCAGGAGAC-
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T C G T A A C T G C T G A A C G T A T G C A G T C C G T A A C T G A C T G C G T A A C T G T C G A A G T C A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T