Information for 3-GNCTGSAGCC (Motif 12)

A T C G G T A C T G A C A G C T A T C G A T G C C T G A A C T G G T A C G T A C
Reverse Opposite:
A C T G A C T G T G A C A G C T T A C G A T G C T C G A A C T G C A T G T A G C
p-value:1e-2
log p-value:-6.566e+00
Information Content per bp:1.555
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.74%
Number of Background Sequences with motif1749.8
Percentage of Background Sequences with motif3.58%
Average Position of motif in Targets47.7 +/- 26.8bp
Average Position of motif in Background50.5 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GNCTGSAGCC
---CGGAGC-
 A T C G G T A C T G A C A G C T A T C G A T G C C T G A A C T G G T A C G T A C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GNCTGSAGCC
GRTGMTRGAGCC
 A C G T A C G T A T C G G T A C T G A C A G C T A T C G A T G C C T G A A C T G G T A C G T A C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GNCTGSAGCC
-----CAGCC
 A T C G G T A C T G A C A G C T A T C G A T G C C T G A A C T G G T A C G T A C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GNCTGSAGCC--
----BCAGACWA
 A T C G G T A C T G A C A G C T A T C G A T G C C T G A A C T G G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GNCTGSAGCC
---NGAAGC-
 A T C G G T A C T G A C A G C T A T C G A T G C C T G A A C T G G T A C G T A C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GNCTGSAGCC----
TGCCTGCGYCMCCTT
 A C G T A T C G G T A C T G A C A G C T A T C G A T G C C T G A A C T G G T A C G T A C A C G T A C G T A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GNCTGSAGCC---
---TGGGGCCCAC
 A T C G G T A C T G A C A G C T A T C G A T G C C T G A A C T G G T A C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GNCTGSAGCC---
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A T C G G T A C T G A C A G C T A T C G A T G C C T G A A C T G G T A C G T A C A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GNCTGSAGCC---
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A T C G G T A C T G A C A G C T A T C G A T G C C T G A A C T G G T A C G T A C A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

DMRT3/MA0610.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GNCTGSAGCC--
-AATGTATCAAT
 A T C G G T A C T G A C A G C T A T C G A T G C C T G A A C T G G T A C G T A C A C G T A C G T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T