Information for 2-TGTCACTCTG (Motif 11)

G A C T A C T G G A C T T A G C G C T A A T G C G C A T G A T C G C A T A T C G
Reverse Opposite:
T A G C C G T A C T A G C G T A T A C G C G A T A T C G C T G A T G A C C T G A
p-value:1e-4
log p-value:-1.104e+01
Information Content per bp:1.665
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif13.61%
Number of Background Sequences with motif4434.6
Percentage of Background Sequences with motif9.07%
Average Position of motif in Targets51.7 +/- 26.7bp
Average Position of motif in Background49.8 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGTCACTCTG
NCTGTCAATCAN
 A C G T A C G T G A C T A C T G G A C T T A G C G C T A A T G C G C A T G A T C G C A T A T C G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGTCACTCTG
SCTGTCAVTCAV
 A C G T A C G T G A C T A C T G G A C T T A G C G C T A A T G C G C A T G A T C G C A T A T C G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGTCACTCTG
GSCTGTCACTCA-
 A C G T A C G T A C G T G A C T A C T G G A C T T A G C G C T A A T G C G C A T G A T C G C A T A T C G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTCACTCTG
CCTGTCAA----
 A C G T A C G T G A C T A C T G G A C T T A G C G C T A A T G C G C A T G A T C G C A T A T C G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGTCACTCTG
VGCTGWCAVB---
 A C G T A C G T A C G T G A C T A C T G G A C T T A G C G C T A A T G C G C A T G A T C G C A T A T C G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTCACTCTG
NTGTCAN----
 A C G T G A C T A C T G G A C T T A G C G C T A A T G C G C A T G A T C G C A T A T C G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTCACTCTG-----
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T G A C T A C T G G A C T T A G C G C T A A T G C G C A T G A T C G C A T A T C G A C G T A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTCACTCTG
GCTGTTACCCT-
 A C G T A C G T G A C T A C T G G A C T T A G C G C T A A T G C G C A T G A T C G C A T A T C G
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGTCACTCTG---
NAGGTCACNNTGACC
 A C G T A C G T G A C T A C T G G A C T T A G C G C T A A T G C G C A T G A T C G C A T A T C G A C G T A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGTCACTCTG
AGTCACGC--
 G A C T A C T G G A C T T A G C G C T A A T G C G C A T G A T C G C A T A T C G
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T