Information for 5-GGCCCGCAAA (Motif 15)

C A T G T C A G T A G C T G A C T A G C A T C G T G A C T G C A G T C A T C G A
Reverse Opposite:
A G C T C A G T A C G T A C T G T A G C A T C G A C T G A T C G A G T C G T A C
p-value:1e-8
log p-value:-1.926e+01
Information Content per bp:1.656
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif3778.9
Percentage of Background Sequences with motif8.08%
Average Position of motif in Targets51.0 +/- 28.2bp
Average Position of motif in Background49.7 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGCCCGCAAA
TBGCACGCAA-
 A C G T C A T G T C A G T A G C T G A C T A G C A T C G T G A C T G C A G T C A T C G A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCCCGCAAA
TACCCGCATN
 C A T G T C A G T A G C T G A C T A G C A T C G T G A C T G C A G T C A T C G A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGCCCGCAAA---
TCGTACCCGCATCATT
 A C G T A C G T A C G T C A T G T C A G T A G C T G A C T A G C A T C G T G A C T G C A G T C A T C G A A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCCCGCAAA---
AAGCCCCCCAAAAAT
 A C G T A C G T C A T G T C A G T A G C T G A C T A G C A T C G T G A C T G C A G T C A T C G A A C G T A C G T A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCCCGCAAA
AAACCGCAAA
 C A T G T C A G T A G C T G A C T A G C A T C G T G A C T G C A G T C A T C G A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCCCGCAAA
CTGCCCGCA--
 A C G T C A T G T C A G T A G C T G A C T A G C A T C G T G A C T G C A G T C A T C G A
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGCCCGCAAA
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C G T C A T G T C A G T A G C T G A C T A G C A T C G T G A C T G C A G T C A T C G A
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCGCAAA
GTACCCGCATN
 A C G T C A T G T C A G T A G C T G A C T A G C A T C G T G A C T G C A G T C A T C G A
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCCCGCAAA----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T C A T G T C A G T A G C T G A C T A G C A T C G T G A C T G C A G T C A T C G A A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGCCCGCAAA
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C G T C A T G T C A G T A G C T G A C T A G C A T C G T G A C T G C A G T C A T C G A
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T