Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.286e+01 | 0.0009 | 28.0 | 7.82% | 1346.8 | 2.89% | motif file (matrix) |
svg |
2 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.217e+01 | 0.0009 | 24.0 | 6.70% | 1087.2 | 2.33% | motif file (matrix) |
svg |
3 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.185e+01 | 0.0009 | 43.0 | 12.01% | 2722.5 | 5.83% | motif file (matrix) |
svg |
4 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.141e+01 | 0.0010 | 32.0 | 8.94% | 1791.1 | 3.84% | motif file (matrix) |
svg |
5 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.002e+01 | 0.0032 | 23.0 | 6.42% | 1163.8 | 2.49% | motif file (matrix) |
svg |
6 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-4 | -9.794e+00 | 0.0034 | 42.0 | 11.73% | 2876.3 | 6.16% | motif file (matrix) |
svg |
7 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-4 | -9.290e+00 | 0.0048 | 15.0 | 4.19% | 607.2 | 1.30% | motif file (matrix) |
svg |
8 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.925e+00 | 0.0061 | 31.0 | 8.66% | 1953.1 | 4.19% | motif file (matrix) |
svg |
9 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.569e+00 | 0.0077 | 24.0 | 6.70% | 1370.9 | 2.94% | motif file (matrix) |
svg |
10 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.521e+00 | 0.0077 | 42.0 | 11.73% | 3051.0 | 6.54% | motif file (matrix) |
svg |
11 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-3 | -7.762e+00 | 0.0141 | 30.0 | 8.38% | 1997.9 | 4.28% | motif file (matrix) |
svg |
12 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.293e+00 | 0.0206 | 36.0 | 10.06% | 2639.2 | 5.66% | motif file (matrix) |
svg |
13 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-3 | -6.987e+00 | 0.0259 | 15.0 | 4.19% | 758.1 | 1.62% | motif file (matrix) |
svg |
14 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -6.723e+00 | 0.0313 | 9.0 | 2.51% | 331.9 | 0.71% | motif file (matrix) |
svg |
15 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.655e+00 | 0.0313 | 35.0 | 9.78% | 2637.4 | 5.65% | motif file (matrix) |
svg |
16 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.207e+00 | 0.0459 | 38.0 | 10.61% | 3017.6 | 6.47% | motif file (matrix) |
svg |
17 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.928e+00 | 0.0571 | 31.0 | 8.66% | 2351.9 | 5.04% | motif file (matrix) |
svg |
18 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.872e+00 | 0.0571 | 16.0 | 4.47% | 938.5 | 2.01% | motif file (matrix) |
svg |
19 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-2 | -5.607e+00 | 0.0703 | 5.0 | 1.40% | 131.0 | 0.28% | motif file (matrix) |
svg |
20 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.587e+00 | 0.0703 | 7.0 | 1.96% | 253.8 | 0.54% | motif file (matrix) |
svg |
21 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.013e+00 | 0.1153 | 3.0 | 0.84% | 49.8 | 0.11% | motif file (matrix) |
svg |
22 |
| YY1(Zf)/Promoter/Homer | 1e-2 | -4.976e+00 | 0.1153 | 7.0 | 1.96% | 284.4 | 0.61% | motif file (matrix) |
svg |
23 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.749e+00 | 0.1371 | 3.0 | 0.84% | 54.7 | 0.12% | motif file (matrix) |
svg |
24 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.727e+00 | 0.1371 | 26.0 | 7.26% | 2043.0 | 4.38% | motif file (matrix) |
svg |
25 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -4.658e+00 | 0.1381 | 41.0 | 11.45% | 3649.6 | 7.82% | motif file (matrix) |
svg |
26 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.627e+00 | 0.1381 | 12.0 | 3.35% | 711.9 | 1.53% | motif file (matrix) |
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