Information for 7-CGGCGCCGAGGCCTCT (Motif 9)

A G T C A T C G A C T G A G T C A C T G A G T C G T A C A C T G G T C A A C T G C T A G A G T C A G T C A C G T A G T C A C G T
Reverse Opposite:
G T C A C T A G C G T A A C T G A C T G A G T C A G T C A C G T A G T C A C T G A C T G G T A C A C T G G T A C A T G C A C T G
p-value:1e-11
log p-value:-2.607e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.6 +/- 25.2bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CGGCGCCGAGGCCTCT
-GGGGCCGAGGCCTG-
 A G T C A T C G A C T G A G T C A C T G A G T C G T A C A C T G G T C A A C T G C T A G A G T C A G T C A C G T A G T C A C G T
A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CGGCGCCGAGGCCTCT
------CNAGGCCT--
 A G T C A T C G A C T G A G T C A C T G A G T C G T A C A C T G G T C A A C T G C T A G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CGGCGCCGAGGCCTCT
------CTAGGCCT--
 A G T C A T C G A C T G A G T C A C T G A G T C G T A C A C T G G T C A A C T G C T A G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CGGCGCCGAGGCCTCT
AGCTCGGCGCCAAAAGC---
 A C G T A C G T A C G T A C G T A G T C A T C G A C T G A G T C A C T G A G T C G T A C A C T G G T C A A C T G C T A G A G T C A G T C A C G T A G T C A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CGGCGCCGAGGCCTCT
CCTTCGGCGCCAAAAGG---
 A C G T A C G T A C G T A C G T A G T C A T C G A C T G A G T C A C T G A G T C G T A C A C T G G T C A A C T G C T A G A G T C A G T C A C G T A G T C A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:CGGCGCCGAGGCCTCT
-------GTGACCTT-
 A G T C A T C G A C T G A G T C A C T G A G T C G T A C A C T G G T C A A C T G C T A G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:CGGCGCCGAGGCCTCT
------BNTGDCCTTG
 A G T C A T C G A C T G A G T C A C T G A G T C G T A C A C T G G T C A A C T G C T A G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CGGCGCCGAGGCCTCT
--GCTCCG--------
 A G T C A T C G A C T G A G T C A C T G A G T C G T A C A C T G G T C A A C T G C T A G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-CGGCGCCGAGGCCTCT
GCCGCGCAGTGCGT---
 A C G T A G T C A T C G A C T G A G T C A C T G A G T C G T A C A C T G G T C A A C T G C T A G A G T C A G T C A C G T A G T C A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:CGGCGCCGAGGCCTCT
-GGGGGCGGGGCC---
 A G T C A T C G A C T G A G T C A C T G A G T C G T A C A C T G G T C A A C T G C T A G A G T C A G T C A C G T A G T C A C G T
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T