Information for 5-CGGAGCCTTTGCTCCC (Motif 5)

A G T C A C T G A C T G C G T A C A T G G T A C A T G C A C G T A G C T A C G T T A C G A G T C C G A T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G C T A G C G T A A C T G A G T C C G T A C T G A C G T A T A C G A C T G G T A C A C G T T G A C A G T C C T A G
p-value:1e-13
log p-value:-3.213e+01
Information Content per bp:1.810
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 24.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGAGCCTTTGCTCCC----
GGYAGCAYDTGCTDCCCNNN
 A G T C A C T G A C T G C G T A C A T G G T A C A T G C A C G T A G C T A C G T T A C G A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CGGAGCCTTTGCTCCC
------CNGTCCTCCC
 A G T C A C T G A C T G C G T A C A T G G T A C A T G C A C G T A G C T A C G T T A C G A G T C C G A T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGGAGCCTTTGCTCCC
CGGAGC----------
 A G T C A C T G A C T G C G T A C A T G G T A C A T G C A C G T A G C T A C G T T A C G A G T C C G A T A G T C A G T C A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CGGAGCCTTTGCTCCC-
--TGGACTTTGNNCTCN
 A G T C A C T G A C T G C G T A C A T G G T A C A T G C A C G T A G C T A C G T T A C G A G T C C G A T A G T C A G T C A G T C A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CGGAGCCTTTGCTCCC
-----YCTTTGTTCC-
 A G T C A C T G A C T G C G T A C A T G G T A C A T G C A C G T A G C T A C G T T A C G A G T C C G A T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.47
Offset:5
Orientation:forward strand
Alignment:CGGAGCCTTTGCTCCC
-----CCTTTGTTTT-
 A G T C A C T G A C T G C G T A C A T G G T A C A T G C A C G T A G C T A C G T T A C G A G T C C G A T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.47
Offset:1
Orientation:forward strand
Alignment:CGGAGCCTTTGCTCCC--
-AATCCCTTTGATCTATC
 A G T C A C T G A C T G C G T A C A T G G T A C A T G C A C G T A G C T A C G T T A C G A G T C C G A T A G T C A G T C A G T C A C G T A C G T
A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:CGGAGCCTTTGCTCCC--
--TGGACTTTGNNCTNTG
 A G T C A C T G A C T G C G T A C A T G G T A C A T G C A C G T A G C T A C G T T A C G A G T C C G A T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CGGAGCCTTTGCTCCC
--TGACCTTTGCCCCA
 A G T C A C T G A C T G C G T A C A T G G T A C A T G C A C G T A G C T A C G T T A C G A G T C C G A T A G T C A G T C A G T C
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.46
Offset:4
Orientation:forward strand
Alignment:CGGAGCCTTTGCTCCC-----
----AAGCATACGCCCAACTT
 A G T C A C T G A C T G C G T A C A T G G T A C A T G C A C G T A G C T A C G T T A C G A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T