Information for 23-GTCTGGGAGCGCGGGC (Motif 41)

A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C T G A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C
p-value:1e-5
log p-value:-1.249e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.3 +/- 25.8bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCTGGGAGCGCGGGC
CTGTCTGG----------
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C T G A C T G A C T G A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTCTGGGAGCGCGGGC-
--AAGGKGRCGCAGGCA
 A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C T G A C T G A C T G A G T C A C G T
A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0095.1_Zfp161_1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTCTGGGAGCGCGGGC----
----TGGCGCGCGCGCCTGA
 A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GTCTGGGAGCGCGGGC
NNTNNTGTCTGGNNTNG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C T G A C T G A C T G A G T C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTCTGGGAGCGCGGGC
VBSYGTCTGG----------
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C T G A C T G A C T G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGGAGCGCGGGC
TGTCAGGGGGCG-----
 A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C T G A C T G A C T G A G T C
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GTCTGGGAGCGCGGGC
----CGGAGC------
 A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GTCTGGGAGCGCGGGC
------GAGSCCGAGC
 A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGGAGCGCGGGC
GGTCTGGCAT-------
 A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C T G A C T G A C T G A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GTCTGGGAGCGCGGGC
GGGGCTYGKCTGGGA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C T G A C T G A C T G A G T C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T