Information for 9-CATCACGGAT (Motif 33)

A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T A C T G
p-value:1e-6
log p-value:-1.456e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 38.2bp
Average Position of motif in Background56.8 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATCACGGAT
AGTCACGC--
 A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C G T
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATCACGGAT-------
CGTCACGCATGACTGCA
 A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PAX9/MA0781.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATCACGGAT-------
CGTCACGCATGACTGCA
 A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CATCACGGAT
--GCACGTAY
 A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C G T
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CATCACGGAT--
--GCACGTACCC
 A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PB0045.1_Myb_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CATCACGGAT-----
NNNNTAACGGTTNNNAN
 A C G T A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

Atf1/MA0604.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CATCACGGAT
-ATGACGTA-
 A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C G T
A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CATCACGGAT-----
NNANTAACGGTTNNNAN
 A C G T A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

SPDEF/MA0686.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CATCACGGAT---
--ACCCGGATGTA
 A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CATCACGGAT
---CACGCA-
 A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T