Information for 20-GCGCTGTGGGTGAAGA (Motif 32)

A T C G A G T C A C T G A G T C A C G T A C T G C G A T A T C G A C T G C T A G A C G T A C T G C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T G T A C A C G T A C G T A G T C G T C A A G T C A G T C A T G C C G T A A G T C G T C A A C T G A G T C C T A G A T G C
p-value:1e-6
log p-value:-1.469e+01
Information Content per bp:1.908
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 22.3bp
Average Position of motif in Background63.9 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCGCTGTGGGTGAAGA
--GCTGTG--------
 A T C G A G T C A C T G A G T C A C G T A C T G C G A T A T C G A C T G C T A G A C G T A C T G C G T A C G T A A C T G C G T A
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCGCTGTGGGTGAAGA
--GCTGTGGTTT----
 A T C G A G T C A C T G A G T C A C G T A C T G C G A T A T C G A C T G C T A G A C G T A C T G C G T A C G T A A C T G C G T A
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCGCTGTGGGTGAAGA
-GTCTGTGGTTT----
 A T C G A G T C A C T G A G T C A C G T A C T G C G A T A T C G A C T G C T A G A C G T A C T G C G T A C G T A A C T G C G T A
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCGCTGTGGGTGAAGA
--NGCGTGGGCGGR--
 A T C G A G T C A C T G A G T C A C G T A C T G C G A T A T C G A C T G C T A G A C G T A C T G C G T A C G T A A C T G C G T A
A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCGCTGTGGGTGAAGA
--NNTGTGGTTT----
 A T C G A G T C A C T G A G T C A C G T A C T G C G A T A T C G A C T G C T A G A C G T A C T G C G T A C G T A A C T G C G T A
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCGCTGTGGGTGAAGA
--TGCGTGGGYG----
 A T C G A G T C A C T G A G T C A C G T A C T G C G A T A T C G A C T G C T A G A C G T A C T G C G T A C G T A A C T G C G T A
A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCGCTGTGGGTGAAGA
----RGKGGGCGGAGC
 A T C G A G T C A C T G A G T C A C G T A C T G C G A T A T C G A C T G C T A G A C G T A C T G C G T A C G T A A C T G C G T A
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GCGCTGTGGGTGAAGA-
-----GTGGGGGAGGGG
 A T C G A G T C A C T G A G T C A C G T A C T G C G A T A T C G A C T G C T A G A C G T A C T G C G T A C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCGCTGTGGGTGAAGA
-NNHTGTGGTTWN---
 A T C G A G T C A C T G A G T C A C G T A C T G C G A T A T C G A C T G C T A G A C G T A C T G C G T A C G T A A C T G C G T A
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:GCGCTGTGGGTGAAGA------
-------GGGCGATGACCAYTC
 A T C G A G T C A C T G A G T C A C G T A C T G C G A T A T C G A C T G C T A G A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C