Information for 19-CCTCTGGTGRCMC (Motif 31)

A G T C A G T C C G A T A G T C A C G T A C T G C T A G A C G T A C T G C T G A A G T C T G C A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G C T A G T C G T C A A G T C A G T C C G T A C T A G C G T A A C T G A C T G
p-value:1e-6
log p-value:-1.605e+01
Information Content per bp:1.847
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif15.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.8 +/- 20.0bp
Average Position of motif in Background59.8 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTGGTGRCMC
TCCCCTGGGGAC--
 A C G T A G T C A G T C C G A T A G T C A C G T A C T G C T A G A C G T A C T G C T G A A G T C T G C A A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-9
Orientation:forward strand
Alignment:---------CCTCTGGTGRCMC
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G T C A C G T A C T G C T A G A C G T A C T G C T G A A G T C T G C A A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CCTCTGGTGRCMC
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G T C A C G T A C T G C T A G A C G T A C T G C T G A A G T C T G C A A G T C
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CCTCTGGTGRCMC
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G T C A C G T A C T G C T A G A C G T A C T G C T G A A G T C T G C A A G T C
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGGTGRCMC
TGWCCTCARNTGACC-
 A C G T A C G T A C G T A G T C A G T C C G A T A G T C A C G T A C T G C T A G A C G T A C T G C T G A A G T C T G C A A G T C
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGGTGRCMC-
TGACCTTTCGTGACCTT
 A C G T A C G T A C G T A G T C A G T C C G A T A G T C A C G T A C T G C T A G A C G T A C T G C T G A A G T C T G C A A G T C A C G T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGGTGRCMC
TGACCTNTAGTAACCC
 A C G T A C G T A C G T A G T C A G T C C G A T A G T C A C G T A C T G C T A G A C G T A C T G C T G A A G T C T G C A A G T C
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCTCTGGTGRCMC
NTGCCCANNGGTNA---
 A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G T C A C G T A C T G C T A G A C G T A C T G C T G A A G T C T G C A A G T C
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCTCTGGTGRCMC-
----TGCTGACTCA
 A G T C A G T C C G A T A G T C A C G T A C T G C T A G A C G T A C T G C T G A A G T C T G C A A G T C A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Znf423/MA0116.1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCTCTGGTGRCMC
GCACCCCTGGGTGCC--
 A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G T C A C G T A C T G C T A G A C G T A C T G C T G A A G T C T G C A A G T C
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T