Information for 16-TCTCTTGTTGGGT (Motif 28)

A C G T A G T C A C G T A T G C A C G T C G A T A C T G C G A T A C G T A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C G T A C G T A C C G T A C G T A A G T C C G T A C G T A A T C G C G T A C T A G C G T A
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.920
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 19.8bp
Average Position of motif in Background51.1 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCTCTTGTTGGGT--
TCNCCTGCTGNGNNN
 A C G T A G T C A C G T A T G C A C G T C G A T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCTCTTGTTGGGT--
TNTCCTGCTGTGNNG
 A C G T A G T C A C G T A T G C A C G T C G A T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCTCTTGTTGGGT---
-NTNTTGTTGTTTGTN
 A C G T A G T C A C G T A T G C A C G T C G A T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCTCTTGTTGGGT----
NNCTTTGTTTTGNTNNN
 A C G T A G T C A C G T A T G C A C G T C G A T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTCTTGTTGGGT--
NNTCCTGCTGTGNNN
 A C G T A G T C A C G T A T G C A C G T C G A T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTTGTTGGGT--
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A G T C A C G T A T G C A C G T C G A T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCTCTTGTTGGGT-
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C A C G T C G A T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTCTTGTTGGGT---
NNTTTTGTTTTGATNT
 A C G T A G T C A C G T A T G C A C G T C G A T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTCTTGTTGGGT
CCCCCTGCTGTG-
 A C G T A G T C A C G T A T G C A C G T C G A T A C T G C G A T A C G T A C T G A C T G A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCTCTTGTTGGGT--
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A G T C A C G T A T G C A C G T C G A T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A