Information for 17-GGCTTTGCCCTGAGCA (Motif 25)

A T C G A C T G A G T C A G C T A C G T A C G T A C T G A G T C A T G C A G T C A C G T A C T G C G T A A C T G A G T C G C T A
Reverse Opposite:
C A G T A C T G A G T C C G A T A G T C G T C A A C T G A T C G A C T G A G T C C G T A C G T A C T G A A C T G A G T C A T G C
p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.915
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 10.0bp
Average Position of motif in Background39.2 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGCTTTGCCCTGAGCA
----CTGCCCGCA---
 A T C G A C T G A G T C A G C T A C G T A C G T A C T G A G T C A T G C A G T C A C G T A C T G C G T A A C T G A G T C G C T A
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTTGCCCTGAGCA
TGGACTTTGNNCTNTG--
 A C G T A C G T A T C G A C T G A G T C A G C T A C G T A C G T A C T G A G T C A T G C A G T C A C G T A C T G C G T A A C T G A G T C G C T A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTTGCCCTGAGCA
TGACCTTTGCCCTA----
 A C G T A C G T A T C G A C T G A G T C A G C T A C G T A C G T A C T G A G T C A T G C A G T C A C G T A C T G C G T A A C T G A G T C G C T A
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTTGCCCTGAGCA
TGGACTTTGNNCTCN---
 A C G T A C G T A T C G A C T G A G T C A G C T A C G T A C G T A C T G A G T C A T G C A G T C A C G T A C T G C G T A A C T G A G T C G C T A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTGCCCTGAGCA
TGACCTTGACCT-----
 A C G T A T C G A C T G A G T C A G C T A C G T A C G T A C T G A G T C A T G C A G T C A C G T A C T G C G T A A C T G A G T C G C T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTGCCCTGAGCA
TGACCTTGACCT-----
 A C G T A T C G A C T G A G T C A G C T A C G T A C G T A C T G A G T C A T G C A G T C A C G T A C T G C G T A A C T G A G T C G C T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTGCCCTGAGCA
NNGCNCTGCGCGGC---
 A C G T A T C G A C T G A G T C A G C T A C G T A C G T A C T G A G T C A T G C A G T C A C G T A C T G C G T A A C T G A G T C G C T A
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGCTTTGCCCTGAGCA--
----GTGCCGTGTGCAAA
 A T C G A C T G A G T C A G C T A C G T A C G T A C T G A G T C A T G C A G T C A C G T A C T G C G T A A C T G A G T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGCTTTGCCCTGAGCA
----ATGCCCTGAGGC
 A T C G A C T G A G T C A G C T A C G T A C G T A C T G A G T C A T G C A G T C A C G T A C T G C G T A A C T G A G T C G C T A
A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GGCTTTGCCCTGAGCA
ATTGGACTTTGACCCC----
 A C G T A C G T A C G T A C G T A T C G A C T G A G T C A G C T A C G T A C G T A C T G A G T C A T G C A G T C A C G T A C T G C G T A A C T G A G T C G C T A
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T A C G T