Information for 16-CTTTTACTATCCCACG (Motif 24)

G T A C C A G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A A C G T A G T C G T A C A G T C C T G A A G T C A C T G
Reverse Opposite:
A G T C A C T G A G C T C T A G A C T G A C T G T G C A A C G T C G T A A C T G A C G T C G T A C G T A C G T A G T C A A C T G
p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.885
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 26.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC12/MA0906.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTTTTACTATCCCACG
NTTTTACGACC-----
 G T A C C A G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A A C G T A G T C G T A C A G T C C T G A A G T C A C T G
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTTTACTATCCCACG
NTTTTACGACC-----
 G T A C C A G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A A C G T A G T C G T A C A G T C C T G A A G T C A C T G
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTACTATCCCACG
ANTTTTACGACC-----
 A C G T G T A C C A G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A A C G T A G T C G T A C A G T C C T G A A G T C A C T G
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTTTACTATCCCACG
NTTTTACGAC------
 G T A C C A G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A A C G T A G T C G T A C A G T C C T G A A G T C A C T G
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTTTACTATCCCACG
NTTTTACGAGN-----
 G T A C C A G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A A C G T A G T C G T A C A G T C C T G A A G T C A C T G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTACTATCCCACG
GNNNTTTTACGACCTNA--
 A C G T A C G T A C G T G T A C C A G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A A C G T A G T C G T A C A G T C C T G A A G T C A C T G
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTTTTACTATCCCACG
NTTTTACGACT-----
 G T A C C A G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A A C G T A G T C G T A C A G T C C T G A A G T C A C T G
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTACTATCCCACG
NAATTTTATTACCTNN--
 A C G T A C G T G T A C C A G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A A C G T A G T C G T A C A G T C C T G A A G T C A C T G
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTACTATCCCACG
NNNATTTTACGACNNTN--
 A C G T A C G T A C G T G T A C C A G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A A C G T A G T C G T A C A G T C C T G A A G T C A C T G
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTTTACTATCCCACG
NTTTTACGAC------
 G T A C C A G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A A C G T A G T C G T A C A G T C C T G A A G T C A C T G
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T