Information for 12-CCYGCTGCRRCSM (Motif 20)

G T A C A T G C A G C T A C T G A G T C A C G T A C T G A G T C C T A G C T G A G T A C A T G C G T A C
Reverse Opposite:
A C T G A T C G A C T G A G C T A G T C A C T G A G T C C G T A A C T G A G T C C T G A A T C G A C T G
p-value:1e-9
log p-value:-2.118e+01
Information Content per bp:1.823
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif30.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.9 +/- 27.1bp
Average Position of motif in Background50.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCYGCTGCRRCSM
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T G T A C A T G C A G C T A C T G A G T C A C G T A C T G A G T C C T A G C T G A G T A C A T G C G T A C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCYGCTGCRRCSM
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T G T A C A T G C A G C T A C T G A G T C A C G T A C T G A G T C C T A G C T G A G T A C A T G C G T A C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CCYGCTGCRRCSM
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T G T A C A T G C A G C T A C T G A G T C A C G T A C T G A G T C C T A G C T G A G T A C A T G C G T A C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CCYGCTGCRRCSM
CCTGCTGAGH---
 G T A C A T G C A G C T A C T G A G T C A C G T A C T G A G T C C T A G C T G A G T A C A T G C G T A C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCYGCTGCRRCSM
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T G T A C A T G C A G C T A C T G A G T C A C G T A C T G A G T C C T A G C T G A G T A C A T G C G T A C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCYGCTGCRRCSM
CCCCCTGCTGTG----
 A C G T A C G T A C G T G T A C A T G C A G C T A C T G A G T C A C G T A C T G A G T C C T A G C T G A G T A C A T G C G T A C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CCYGCTGCRRCSM
GACCCCCCGCTGCGC---
 A C G T A C G T A C G T A C G T A C G T G T A C A T G C A G C T A C T G A G T C A C G T A C T G A G T C C T A G C T G A G T A C A T G C G T A C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCYGCTGCRRCSM
CAGCAGCTGN-----
 A C G T A C G T G T A C A T G C A G C T A C T G A G T C A C G T A C T G A G T C C T A G C T G A G T A C A T G C G T A C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCYGCTGCRRCSM
GACCCCCCGCTGTG----
 A C G T A C G T A C G T A C G T A C G T G T A C A T G C A G C T A C T G A G T C A C G T A C T G A G T C C T A G C T G A G T A C A T G C G T A C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCYGCTGCRRCSM
NNACAGCTGC-----
 A C G T A C G T G T A C A T G C A G C T A C T G A G T C A C G T A C T G A G T C C T A G C T G A G T A C A T G C G T A C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T