Information for 3-TCGCGGGACTTTTTTT (Motif 2)

A C G T A T G C A T C G A T G C A C T G A T C G C T A G T C G A G T A C A C G T A C G T A C G T A C G T G A C T A C G T C G A T
Reverse Opposite:
G C T A G T C A C T G A T G C A C G T A T G C A C G T A A C T G A G C T A G T C T A G C G T A C A T C G A T G C A T C G T G C A
p-value:1e-16
log p-value:-3.702e+01
Information Content per bp:1.703
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif40.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets58.5 +/- 24.1bp
Average Position of motif in Background51.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TCGCGGGACTTTTTTT
----TTGACTTTT---
 A C G T A T G C A T C G A T G C A C T G A T C G C T A G T C G A G T A C A C G T A C G T A C G T A C G T G A C T A C G T C G A T
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCGCGGGACTTTTTTT
NTCGCGCGCCTTNNN--
 A C G T A C G T A T G C A T C G A T G C A C T G A T C G C T A G T C G A G T A C A C G T A C G T A C G T A C G T G A C T A C G T C G A T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCGCGGGACTTTTTTT
CTCTCGCGAGATCTG----
 A C G T A C G T A C G T A C G T A T G C A T C G A T G C A C T G A T C G C T A G T C G A G T A C A C G T A C G T A C G T A C G T G A C T A C G T C G A T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCGCGGGACTTTTTTT
ANCGCGCGCCCTTNN--
 A C G T A C G T A T G C A T C G A T G C A C T G A T C G C T A G T C G A G T A C A C G T A C G T A C G T A C G T G A C T A C G T C G A T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCGCGGGACTTTTTTT
----GGGAATTTCC--
 A C G T A T G C A T C G A T G C A C T G A T C G C T A G T C G A G T A C A C G T A C G T A C G T A C G T G A C T A C G T C G A T
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCGCGGGACTTTTTTT
TCTCGCGAGAAT------
 A C G T A C G T A C G T A T G C A T C G A T G C A C T G A T C G C T A G T C G A G T A C A C G T A C G T A C G T A C G T G A C T A C G T C G A T
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TCGCGGGACTTTTTTT
--------CTTTGT--
 A C G T A T G C A T C G A T G C A C T G A T C G C T A G T C G A G T A C A C G T A C G T A C G T A C G T G A C T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCGCGGGACTTTTTTT
NNATTGGACTTTNGNN
 A C G T A T G C A T C G A T G C A C T G A T C G C T A G T C G A G T A C A C G T A C G T A C G T A C G T G A C T A C G T C G A T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCGCGGGACTTTTTTT
----GGGAATTTCC--
 A C G T A T G C A T C G A T G C A C T G A T C G C T A G T C G A G T A C A C G T A C G T A C G T A C G T G A C T A C G T C G A T
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCGCGGGACTTTTTTT
-GGCGGGAAAH-----
 A C G T A T G C A T C G A T G C A C T G A T C G C T A G T C G A G T A C A C G T A C G T A C G T A C G T G A C T A C G T C G A T
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T A C G T A C G T A C G T